LOCUS AK316186 1495 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79085 complete cds, highly similar to
DNA-(apurinic or apyrimidinic site) lyase 2 (EC 4.2.99.18).
ACCESSION AK316186
VERSION AK316186.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1495)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1495
/cell_line="HeLa"
/cell_type="HeLa cells"
/clone="HELAC2000184"
/clone_lib="HELAC2"
/db_xref="H-InvDB:HIT000499799"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 386..1429
/codon_start=1
/note="highly similar to DNA-(apurinic or apyrimidinic
site) lyase 2 (EC 4.2.99.18)"
/protein_id="BAH14557.1"
/transl_table=1
/translation="MRFYRLLQIRAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLEC
FEEDPGRKWMDSLLSNLGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYG
SRLDYVLGDRTLVIDTFQASFLLPEVMGSDHCPVGAVLSVSSVPAKQCPPLCTRFLPE
FAGTQLKILRFLVPLEQSPVLEQSTLQHNNQTRVQTCQNKAQVRSTRPQPSQVGSSRG
QKNLKSYFQPSPSCPQASPDIELPSLPLMSALMTPKTPEEKAVAKVVKGQAKTSEAKD
EKELRTSFWKSVLAGPLRTPLCGGHREPCVMRTVKKPGPNLGRRFYMCARPRGPPTDP
SSRCNFFLWSRPS"
BASE COUNT 315 a 452 c 421 g 307 t
ORIGIN
1 agttcgctcg cgcctaggtt ggcgcgggct gggaggtgtt ccagcccttt aagatgttgc
61 gcgtggtgag ctggaacatc aatgggattc ggagacccct gcaaggggtg gcaaatcagg
121 aacccagcaa ctgtgccgcc gtggccgtgg ggcgcatttt ggacgagctg gatgcggata
181 tcgtctgtct ccaggaaacc aaagtgacca gggatgcact gacagagccc ctggctatcg
241 ttgagggtta taactcctat ttcagcttca gccgcaaccg tagcggctat tctgcacatg
301 ggaaggtaag gagaagacct tgaccctaat caacgtgtac tgcccccatg cggaccctgg
361 gaggcctgag cggctagtct ttaagatgcg cttctatcgt ttgctgcaaa tccgagcaga
421 agccctcctg gcggcaggca gccatgtgat cattctgggt gacctgaata cagcccaccg
481 ccccattgac cactgggatg cagtcaacct ggaatgcttt gaagaggacc cagggcgcaa
541 gtggatggac agcttgctca gtaacttggg gtgccagtct gcctctcatg tagggccctt
601 catcgatagc taccgctgct tccaaccaaa gcaggagggg gccttcacct gctggtcagc
661 agtcactggc gcccgccatc tcaactatgg ctcccggctt gactatgtgc tgggggacag
721 gaccctggtc atagacacct ttcaggcctc tttcctgctg cctgaggtga tgggctctga
781 ccactgccct gtgggtgcag tcttgagtgt gtcctctgtg cctgcaaaac agtgcccacc
841 tctgtgcacc cgcttcctcc ctgagttcgc aggcacccag ctcaagatcc ttcgcttcct
901 agttcctctc gaacaaagtc ctgtgttgga gcagtcgacg ctgcagcaca acaatcaaac
961 ccgggtacag acatgccaaa acaaagccca agtgcgctca accaggcctc agcccagtca
1021 ggttggctct agcagaggcc agaagaacct gaagagctac tttcagccct cccctagctg
1081 tccccaagcc tctcctgaca tagagctgcc tagcctacca ctgatgagcg ccctcatgac
1141 cccgaagact ccagaagaga aggcagtggc caaagtggtg aaggggcagg ccaagacttc
1201 agaagccaaa gatgagaagg agttacggac ctcattctgg aagtctgtgc tggcggggcc
1261 cttgcgcaca cccctctgtg ggggccacag ggagccatgt gtgatgcgta ctgtgaagaa
1321 gccaggaccc aacttgggcc gccgcttcta catgtgtgcc aggccccggg gtcctcccac
1381 tgacccctcc tcccggtgca acttcttcct ctggagcagg cccagctgaa ccaatggagg
1441 cctggggaca tctggcatgg tcacccctgc acatgatctg aggccagctc ccctt
//