LOCUS AK316171 2264 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79070 complete cds, highly similar to
Optineurin.
ACCESSION AK316171
VERSION AK316171.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2264)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2264
/clone="FEBRA2003230"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000499784"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 444..2006
/codon_start=1
/note="highly similar to Optineurin"
/protein_id="BAH14542.1"
/transl_table=1
/translation="MKLNNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALS
HENEKLKEELGKLKGKSERSSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLG
IVSELQLKLNSSGSSEDSFVEIRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSR
SADGAKNYFEHEELTVSQLLLCLREGNQKVERLEVALKEAKERVSDFEKKTSNRSEIE
TQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKRLQEK
CQALERKNSAIPSELNEKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLTVLQM
THNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEMKQ
TIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEQEQLALQLAVLLKENDAFE
DGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAEDRDWRQQRNIPIHSCPKCGEVLPDI
DTLQIHVMDCII"
BASE COUNT 705 a 499 c 614 g 446 t
ORIGIN
1 aggccgcgca tcagccctag gcaccccagt cccggctgcc ccctccgcca ccgccgccgc
61 ccgccggcag gttccctggt cagcgtccca tcccggtcgg gagttctctc caggcggcac
121 gatgccgagg aaacagtgac cctgagcgaa gccaagccgg gcggcaggaa cttctgcaat
181 gtcccatcaa cctctcagct gcctcactga aaaggaggac agccccagtg aaagcacagg
241 aaatggaccc ccccacctgg cccacccaaa cctggacacg tttaccccgg aggagctgct
301 gcagcagatg aaagagctcc tgaccgagaa ccaccagctg aaagagccat gtggtcaagt
361 ggactagagg gagatttggt tcatcagatc aagtccactt tcctggtgtg tgactccatc
421 actctgaacc tcctgcagaa gccatgaagc taaataatca agccatgaaa gggagatttg
481 aggagctttc ggcctggaca gagaaacaga aggaagaacg ccagtttttt gagatacaga
541 gcaaagaagc aaaagagcgt ctaatggcct tgagtcatga gaatgagaaa ttgaaggaag
601 agcttggaaa actaaaaggg aaatcagaaa ggtcatctga ggaccccact gatgactcca
661 ggcttcccag ggccgaagcg gagcaggaaa aggaccagct caggacccag gtggtgaggc
721 tacaagcaga gaaggcagac ctgttgggca tcgtgtctga actgcagctc aagctgaact
781 ccagcggctc ctcagaagat tcctttgttg aaattaggat ggctgaagga gaagcagaag
841 ggtcagtaaa agaaatcaag catagtcctg ggcccacgag aacagtctcc actggcacgg
901 cattgtctaa atataggagc agatctgcag atggggccaa gaattacttc gaacatgagg
961 agttaactgt gagccagctc ctgctgtgcc taagggaagg gaatcagaag gtggagagac
1021 ttgaagttgc actcaaggag gccaaagaaa gagtttcaga ttttgaaaag aaaacaagta
1081 atcgttctga gattgaaacc cagacagagg ggagcacaga gaaagagaat gatgaagaga
1141 aaggcccgga gactgttgga agcgaagtgg aagcactgaa cctccaggtg acatctctgt
1201 ttaaggagct tcaagaggct catacaaaac tcagcgaagc tgagctaatg aagaagagac
1261 ttcaagaaaa gtgtcaggcc cttgaaagga aaaattctgc aattccatca gagttgaatg
1321 aaaagcaaga gcttgtttat actaacaaaa agttagagct acaagtggaa agcatgctat
1381 cagaaatcaa aatggaacag gctaaaacag aggatgaaaa gtccaaatta actgtgctac
1441 agatgacaca caacaagctt cttcaagaac ataataatgc attgaaaaca attgaggaac
1501 taacaagaaa agagtcagaa aaagtggaca gggcagtgct gaaggaactg agtgaaaaac
1561 tggaactggc agagaaggct ctggcttcca aacagctgca aatggatgaa atgaagcaaa
1621 ccattgccaa gcaggaagag gacctggaaa ccatgaccat cctcagggct cagatggaag
1681 tttactgttc tgattttcat gctgaaagag cagcgagaga gaaaattcat gaggaacagg
1741 agcaactggc attgcagctg gcagttctgc tgaaagagaa tgatgctttc gaagacggag
1801 gcaggcagtc cttgatggag atgcagagtc gtcatggggc gagaacaagt gactctgacc
1861 agcaggctta ccttgttcaa agaggagctg aggacaggga ctggcggcaa cagcggaata
1921 ttccgattca ttcctgcccc aagtgtggag aggttctgcc tgacatagac acgttacaga
1981 ttcacgtgat ggattgcatc atttaagtgt tgatgtatca cctccccaaa actgttggta
2041 aatgtcagat tttttcctcc aagagttgtg cttttgtgtt atttgttttc actcaaatat
2101 tttgcctcat tattcttgtt ttaaaagaaa gaaaacaggc cgggcacagt ggctcatgcc
2161 tgtagtcccg gcgctttggg aggtcgaggt gggtggatca cttggggtca gggtttgaga
2221 ccagcctggc caacatggcg gaaccctgtc tctaccaaaa ttac
//