LOCUS AK316161 1567 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79060 complete cds, highly similar to
T-brain-1 protein.
ACCESSION AK316161
VERSION AK316161.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1567)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1567
/clone="FCBBF3011955"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000499774"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 210..1397
/codon_start=1
/note="highly similar to T-brain-1 protein"
/protein_id="BAH14532.1"
/transl_table=1
/translation="MHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLH
KYQPRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAK
GFRDNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHP
GAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATD
FAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKSGSVLP
CWPNSAAAAARMAGANPYLGEEAEGLAAERSPLPPGAAEDAKPKDLSDSSWIETPSSI
KSIDSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDISGYYGFY
SHS"
BASE COUNT 319 a 533 c 459 g 256 t
ORIGIN
1 cttttgtgga ctggctcgag cgacttttaa aacgatcggc caatgacttc gaaaaggaaa
61 cgagggggac agggggacag actgagctgc gagaaggggg aggattatgc aaaagctatt
121 ttaatcaccc ccagttaata ggaagaaaga atggcctaaa aaagccccag ttaatgggct
181 tcatggtgga gtaaggaaat cgggtctata tgcatccgga ttcccccaac actggggctc
241 actggatgcg ccaagaaatc tcttttggaa aattaaaact tacgaacaac aaaggagctt
301 caaataacaa tgggcagatg gtggttttac agtccttgca caagtaccag ccccgcctgc
361 atgtggtgga agtgaacgag gacggcacgg aggacactag ccagcccggc cgcgtgcaga
421 cgttcacttt ccctgagact cagttcatcg ccgtcaccgc ctaccagaac acggatatta
481 cacaactgaa aatagatcac aacccttttg caaaaggatt tcgggataat tatgacacga
541 tctacaccgg ctgtgacatg gaccgcctga ccccctcgcc caacgactcg ccgcgctcgc
601 agatcgtgcc cggggcccgc tacgccatgg ccggctcttt cctgcaggac cagttcgtga
661 gcaactacgc caaggcccgc ttccacccgg gcgcgggcgc gggccccggg ccgggtacgg
721 accgcagcgt gccgcacacc aacgggctgc tgtcgccgca gcaggccgag gacccgggcg
781 cgccctcgcc gcaacgctgg tttgtgacgc cggccaacaa ccggctggac ttcgcggcct
841 cggcctatga cacggccacg gacttcgcgg gcaacgcggc cacgctgctc tcttacgcgg
901 cggcgggcgt gaaggcgctg ccgctgcagg ctgcaggctg cactggccgc ccgctcggct
961 actacgccga cccgtcgggc tggggcgccc gcagtccccc gcagtactgc ggcaccaagt
1021 cgggctcggt gctgccctgc tggcccaaca gcgccgcggc cgccgcgcgc atggccggcg
1081 ccaatcccta cctgggcgag gaggccgagg gcctggccgc cgagcgctcg ccgctgccgc
1141 ccggcgccgc cgaggacgcc aagcccaagg acctgtccga ttccagctgg atcgagacgc
1201 cctcctcgat caagtccatc gactccagcg actcggggat ttacgagcag gccaagcgga
1261 ggcggatctc gccggccgac acgcccgtgt ccgagagttc gtccccgctc aagagcgagg
1321 tgctggccca gcgggactgc gagaagaact gcgccaagga cattagcggc tactatggct
1381 tctactcgca cagctaggcc gcccctgccc gcccggcccc gccgcggccc ggacccccag
1441 ccagcccctc acagctcttc cccagctccg cctccccaca ctcctccttg cgcacccact
1501 cattttattt gaccctcgat ggccgtctgc agcgaataag tgcaggtctc cgagcgtgat
1561 tttaacc
//