LOCUS AK316130 1207 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79029 complete cds, moderately similar to
Cohesin subunit SA-3.
ACCESSION AK316130
VERSION AK316130.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1207)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1207
/clone="CTONG2017088"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000499743"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 391..777
/codon_start=1
/note="moderately similar to Cohesin subunit SA-3"
/protein_id="BAH14501.1"
/transl_table=1
/translation="MIFSMLRKLPKVTCRDVLPEIRAICIEEIGCWMQSYSTSFLTDS
YLKYIGWTLHDKHREVRVKCVKALKGLYGNRDLTARLELFTGRFKDWMASMIVDREYS
VAVEAVRLLILILKIGSQTPATRECI"
BASE COUNT 253 a 351 c 339 g 264 t
ORIGIN
1 tttttttccg aacgcccgca gcagggtcag aagggaggtg gtcgccctcc gtcgtggtct
61 ggcgtgtatt ccgagccttg gtgtctggcg gtttccgagc gttggtgtct ggcggtttcc
121 gagcgttggt gtctggcggt ttccgaccgt tggtgtctgg cggtttccga ccgttggtgt
181 ctggcacgcg ccaccctctc ttgctttggt tgcgccatgc cgatgtacca gacaagaaga
241 caagaaaatg atttgaggac agcttcaatc gcggtgtgaa gaagaaagca gcaaaacgac
301 tactgaaaac aacgccggtg gcaaaatatc caaagaaagg gtcccaagcg gtacatcgtc
361 atagccggaa acagtcagag ccaccagcca atgatctttt caatgctgcg aaagctgcca
421 aaagtgacat gcagggatgt ccttcctgag atccgtgcta tctgcattga ggaaattggg
481 tgttggatgc aaagctacag cacgtctttc ctcaccgaca gctatttaaa atatattggt
541 tggactctgc atgataagca ccgagaagtc cgcgtgaagt gcgtgaaggc tctgaaaggg
601 ctgtacggta accgggacct gaccgcacgc ctggagctct tcactggccg cttcaaggac
661 tggatggctt ccatgatcgt ggacagagag tacagtgtgg cagtggaggc cgtcagatta
721 ctgatactta tccttaaaat cggctcccag acacctgcca ctcgtgaatg catctgataa
781 actcactcac actgaggcct tggggactga gagtgcgatg acatggatcc tgcggacaaa
841 ccgccccagg gcgtacctag caccgaagca tcaggcgcca ctaggtctcc agctccttct
901 cggatgacgt ccttcagcac gccccggtcc cccgagatgt ccagcatcct ctgacttaac
961 cgctcgtaca gggactgatg gagaatgaaa gccaggcctc agagccgcag acccacccgg
1021 ccacccctca gcgtctacgc ccccgaaacg tctgggccct cacctggccg ggggcgtcgt
1081 ccccttccag gactccctgg tttaacgcgc ttccccccat gtcctagctg ccctccctgt
1141 ggcgtgagcc ttcggcctgg tgcgccccgc tgcccttcct ggctgtgact ctggtggggt
1201 tccgaag
//