LOCUS AK316119 2211 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79018 complete cds, highly similar to
Cytoplasmic dynein 1 intermediate chain 2.
ACCESSION AK316119
VERSION AK316119.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2211)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2211
/clone="BRTHA3026389"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000499732"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 92..1984
/codon_start=1
/note="highly similar to Cytoplasmic dynein 1
intermediate chain 2"
/protein_id="BAH14490.1"
/transl_table=1
/translation="MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAV
APVQEESDLEKKRREAEALLQSMGLTPESPIAEQPLRVVTADTCLFHYLVPPPMSPSS
KSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQP
KEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFF
DHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSC
LDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAK
FHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLIS
ISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYT
ACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKP
LYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALN
RVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEEEA
ATRIPA"
BASE COUNT 677 a 427 c 529 g 578 t
ORIGIN
1 agttggtgtt gggggcttag gcgagggacg ttaccgggaa gttgcaggcg ggaggactct
61 tccccatcca gtcacctgac aggtcacaaa catgtcagac aaaagtgaat taaaggctga
121 gttggaacgt aagaagcagc gactggccca aatcagagag gaaaagaaga gaaaagaaga
181 agaaaggaaa aaaaaagaaa cagaccagaa gaaggaagct gttgctcctg tgcaagaaga
241 atcagatctt gaaaaaaaaa ggagagaagc tgaagcattg cttcaaagca tggggctaac
301 tccagaatcc cccattgctg agcaacctct ccgtgtagta acagcggata cctgtctatt
361 tcactattta gtccctcctc ctatgtctcc atcctccaaa tctgtgagca ctccaagtga
421 agctggaagc caagactctg gagatggcgc cgtgggatct agacgaggac ctattaaact
481 tggaatggct aaaatcacgc aagtcgactt tcctcctcga gaaattgtca cgtatacaaa
541 ggaaactcag actccagtta tggctcaacc caaagaagat gaagaggaag atgatgatgt
601 agtggctcct aaaccaccta ttgaacctga agaagagaaa actttaaaga aagatgagga
661 aaatgatagt aaagctcccc ctcatgagct gactgaagaa gaaaagcaac aaatcttgca
721 ctctgaggaa tttttaagtt tctttgacca ttctacaaga attgtagaaa gagctctttc
781 tgagcagatt aacatcttct ttgactatag tgggagagat ttggaagaca aagaaggaga
841 gattcaagca ggtgctaaac tgtcattaaa tcgacaattt tttgacgaac gttggtcaaa
901 gcatcgggtg gttagttgtt tggattggtc atctcagtat ccggagttac tcgtggcttc
961 ctataacaac aatgaagatg cccctcatga gcctgatggt gtggcccttg tatggaatat
1021 gaaatacaaa aaaactaccc cagagtatgt gtttcactgc cagtcagctg tgatgtctgc
1081 cacatttgca aaatttcatc caaatcttgt tgttggtggt acatattcag gccaaattgt
1141 gctttgggat aaccgtagca ataaaagaac tccagtgcaa agaactccac tgtcagcagc
1201 tgcacacaca caccctgtat attgtgtaaa tgttgttgga acacaaaatg ctcacaatct
1261 gattagcatc tctactgatg gaaaaatttg ttcatggagt ctggacatgc tttcccatcc
1321 acaggatagc atggagttgg ttcataaaca gtcaaaagca gtagctgtga catctatgtc
1381 cttccctgtt ggagatgtca acaactttgt tgttgggagt gaagaaggtt ctgtgtacac
1441 agcatgccgc catggcagca aagctggaat cagtgagatg tttgaggggc atcaaggacc
1501 aatcactggc atccattgtc atgcagctgt tggagcagta gacttctcac atctttttgt
1561 cacttcatcg tttgactgga cagtaaagct ttggacaact aagaataaca agcctttgta
1621 ttcatttgaa gataatgcag actatgttta tgatgttatg tggtcaccta cccacccagc
1681 cctgtttgcc tgtgtggatg gcatggggag attggatttg tggaatctca ataatgacac
1741 agaggtacca actgccagca tttctgtgga gggtaatcct gctcttaatc gtgtgagatg
1801 gacccattct ggcagagaga ttgctgtggg tgattctgaa ggacagattg ttatatacga
1861 tgtgggagag cagattgctg ttccccgcaa tgatgaatgg gcacggtttg gccgaacact
1921 tgcagaaatt aatgcaaacc gagctgatgc agaggaggaa gcagctaccc gaatacctgc
1981 ttagttcctg aaaaggggag tgtaactagt ggatttggga aaggttctta agtagatcct
2041 gagactattt gcatgcttct gtctaaatga taattaaaag gaaatttcat ggattaaacc
2101 atgggtttaa tgcagcaagg aaacttacaa tgtcccttta tatataacat gcatcttgtt
2161 ttggatttgt gtcatttttt aatatagctg attgacttca cagaaagcag c
//