LOCUS AK316109 1973 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79008 complete cds, highly similar to
Histone deacetylase 9.
ACCESSION AK316109
VERSION AK316109.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1973)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1973
/clone="BRTHA3011441"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000499722"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 307..1956
/codon_start=1
/note="highly similar to Histone deacetylase 9"
/protein_id="BAH14480.1"
/transl_table=1
/translation="MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREK
QLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQEL
LEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSAT
KDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPL
RKTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMN
LLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPAS
SSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPG
IRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKS
IEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKE
EPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII"
BASE COUNT 592 a 498 c 464 g 419 t
ORIGIN
1 acagacacag ataggagaag ggcaccggct ggagccactt gcaggactga gggtttttgc
61 aacaaaaccc tagcagcctg aagaactcta agccaggttt aattggtttc tttttctcgt
121 gggtagactt aataattttc tacgtattct gacaaagaaa taaccccgaa gcacgttcct
181 atttcccacc tgcttgtagt ttccgggata acctaaactc cagagagcta tagcatccac
241 tctgtccttt ctgctttgca cacagatggg gtggctggac gagagcagct cttggctcag
301 caaagaatgc acagtatgat cagctcagtg gatgtgaagt cagaagttcc tgtgggcctg
361 gagcccatct cacctttaga cctaaggaca gacctcagga tgatgatgcc cgtggtggac
421 cctgttgtcc gtgagaagca attgcagcag gaattacttc ttatccagca gcagcaacaa
481 atccagaagc agcttctgat agcagagttt cagaaacagc atgagaactt gacacggcag
541 catcaggctc agcttcagga gcatatcaag ttgcaacagg aacttctagc cataaaacag
601 caacaagaac tcctagaaaa ggagcagaaa ctggagcagc agaggcaaga acaggaagta
661 gagaggcatc gcagagaaca gcagcttcct cctctcagag gcaaagatag aggacgagaa
721 agggcagtgg caagtacaga agtaaagcag aagcttcaag agttcctact gagtaaatca
781 gcaacgaaag acactccaac taatggaaaa aatcattccg tgagccgcca tcccaagctc
841 tggtacacgg ctgcccacca cacatcattg gatcaaagct ctccacccct tagtggaaca
901 tctccatcct acaagtacac attaccagga gcacaagatg caaaggatga tttccccctt
961 cgaaaaactg aatcctcagt cagtagcagt tctccaggct ctggtcccag ttcaccaaac
1021 aatgggccaa ctggaagtgt tactgaaaat gagacttcgg ttttgccccc tacccctcat
1081 gccgagcaaa tggtttcaca gcaacgcatt ctaattcatg aagattccat gaacctgcta
1141 agtctttata cctctccttc tttgcccaac attaccttgg ggcttcccgc agtgccatcc
1201 cagctcaatg cttcgaattc actcaaagaa aagcagaagt gtgagacgca gacgcttagg
1261 caaggtgttc ctctgcctgg gcagtatgga ggcagcatcc cggcatcttc cagccaccct
1321 catgttactt tagagggaaa gccacccaac agcagccacc aggctctcct gcagcattta
1381 ttattgaaag aacaaatgcg acagcaaaag cttcttgtag ctggtggagt tcccttacat
1441 cctcagtctc ccttggcaac aaaagagaga atttcacctg gcattagagg tacccacaaa
1501 ttgccccgtc acagacccct gaaccgaacc cagtctgcac ctttgcctca gagcacgttg
1561 gctcagctgg tcattcaaca gcaacaccag caattcttgg agaagcagaa gcaataccag
1621 cagcagatcc acatgaacaa actgctttcg aaatctattg aacaactgaa gcaaccaggc
1681 agtcaccttg aggaagcaga ggaagagctt cagggggacc aggcgatgca ggaagacaga
1741 gcgccctcta gtggcaacag cactaggagc gacagcagtg cttgtgtgga tgacacactg
1801 ggacaagttg gggctgtgaa ggtcaaggag gaaccagtgg acagtgatga agatgctcag
1861 atccaggaaa tggaatctgg ggagcaggct gcttttatgc aacaggtaat aggcaaagat
1921 ttagctccag gatttgtaat taaagtcatt atctgaacat gaaatgcatt gca
//