LOCUS AK316105 3559 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79004 complete cds, highly similar to Homo
sapiens transmembrane protein 16D (TMEM16D), mRNA.
ACCESSION AK316105
VERSION AK316105.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3559)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3559
/clone="BRTHA3007175"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000499718"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 212..3079
/codon_start=1
/note="highly similar to Homo sapiens transmembrane
protein 16D (TMEM16D), mRNA"
/protein_id="BAH14476.1"
/transl_table=1
/translation="MEASSSGITNGKTKVFHPEGGVDLQGYQLDMQILPDGPKSDVDF
SEILNAIQEMAKDVNILFDELEAVSSPCKDDDSLLHPGNLTSTSDDASRLEAGGETVP
ERNKSNGLYFRDGKCRIDYILVYRKSNPQTEKREVFERNIRAEGLQMEKESSLINSDI
IFVKLHAPWEVLGRYAEQMNVRMPFRRKIYYLPRRYKFMSRIDKQISRFRRWLPKKPM
RLDKETLPDLEENDCYTAPFSQQRIHHFIIHNKETFFNNATRSRIVHHILQRIKYEEG
KNKIGLNRLLTNGSYEAAFPLHEGSYRSKNSIRTHGAENHRHLLYECWASWGVWYKYQ
PLDLVRRYFGEKIGLYFAWLGWYTGMLFPAAFIGLFVFLYGVTTLDHSQVSKEVCQAT
DIIMCPVCDKYCPFMRLSDSCVYAKVTHLFDNGATVFFAVFMAVWATVFLEFWKRRRA
VIAYDWDLIDWEEEEEEIRPQFEAKYSKKERMDPISGKPEPYQAFTDKCSRLIVSASG
IFFMICVVIAAVFGIVIYRVVTVSTFAAFKWALIRNNSQVATTGTAVCINFCIIMLLN
VLYEKVALLLTNLEQPRTESEWENSFTLKMFLFQFVNLNSSTFYIAFFLGRFTGHPGA
YLRLINRWRLEECHPSGCLIDLCMQMGIIMVLKQTWNNFMELGYPLIQNWWTRRKVRQ
EHGPERKISFPQWEKDYNLQPMNAYGLFDEYLEMILQFGFTTIFVAAFPLAPLLALLN
NIIEIRLDAYKFVTQWRRPLASRAKDIGIWYGILEGIGILSVITNAFVIAITSDFIPR
LVYAYKYGPCAGQGEAGQKCMVGYVNASLSVFRISDFENRSEPESDGSEFSGTPLKYC
RYRDYRDPPHSLVPYGYTLQFWHVLAARLAFIIVFEHLVFCIKHLISYLIPDLPKDLR
DRMRREKYLIQEMMYEAELERLQKERKERKKNGKAHHNEWP"
BASE COUNT 1029 a 759 c 817 g 954 t
ORIGIN
1 ctttctgccg aagacaccaa ggcactgagg aaggatccct tctccttctg ttgactcttt
61 ctatttttat ggtttaagtt tatctattca tggggctgaa aagcgtttgc aaatccatca
121 acggcgaagt gtggcaagcc gcccagcgtc acgtcgtcgc ctgcctgtgg tcaggcattc
181 ctcactccca ccaggcagaa ggtcaataaa aatggaggca agctcttctg gaatcactaa
241 tggaaaaacc aaagtcttcc acccagaagg aggtgtggat ttgcaaggct accagctgga
301 tatgcaaata ctacctgacg ggccaaagag tgatgtggac ttttcagaga ttcttaatgc
361 aatacaagaa atggccaagg atgtcaatat tctttttgat gaattagaag ctgtcagcag
421 tccttgcaaa gatgacgatt ctcttcttca ccctggaaac ctgactagta cttcagatga
481 tgccagcaga ttggaagccg ggggagagac agtgccagaa agaaacaaat caaatggact
541 ttactttcga gatggaaagt gtcgaattga ctacatcctt gtgtacagaa aatccaaccc
601 ccagactgaa aagagagaag tatttgaaag aaacattaga gcagaaggat tgcaaatgga
661 gaaagagtcc tctctaataa atagtgacat tatctttgtg aagttgcatg ccccatggga
721 agtccttgga agatatgcag aacaaatgaa tgtaagaatg cctttcagga gaaaaatcta
781 ttacctgccc cgccgttaca agttcatgag caggatcgat aaacaaataa gcaggtttcg
841 gagatggtta cctaagaagc caatgaggct ggacaaggag acactgccag acctggagga
901 gaatgactgc tacactgccc ctttcagcca gcaaaggatc catcacttca tcatacacaa
961 caaagaaacg ttcttcaaca atgccacaag aagtagaatc gtgcatcaca ttttacaaag
1021 aataaaatat gaagaaggaa aaaacaagat tggtctgaat cgtttgctta ccaatggctc
1081 ctatgaagct gcgtttcccc tgcatgaggg aagttataga agtaaaaact ccattcgaac
1141 ccatggagca gaaaaccacc gacatctact ctatgagtgc tgggcctcct ggggcgtgtg
1201 gtataaatac caacctttgg atcttgtaag gcggtacttt ggagagaaga ttgggttata
1261 ttttgcctgg ttgggctggt acaccggcat gctcttccca gctgccttca ttggattgtt
1321 tgtctttttg tatggcgtca ccactctgga tcacagccaa gtcagtaaag aagtctgcca
1381 agctacagat atcatcatgt gtcctgtgtg tgataaatac tgtccattca tgaggctgtc
1441 agacagctgt gtatatgcca aggtaaccca cctttttgac aatggagcca ctgtcttctt
1501 tgctgttttc atggcagtct gggcaacagt tttcctggag ttttggaaaa gacggcgagc
1561 agtaattgct tatgactggg atttgataga ctgggaagaa gaggaggaag aaatacgacc
1621 ccagtttgaa gccaagtatt ccaagaaaga gcggatggat ccaatttctg gaaagccaga
1681 accttatcaa gcatttacag ataaatgcag cagacttatc gtttctgcat ctggaatatt
1741 ttttatgatc tgcgtggtga ttgctgccgt gttcgggatc gtcatttacc gggtggtgac
1801 tgtcagcact ttcgctgcct ttaagtgggc gttaatcagg aataactctc aggttgcaac
1861 cacagggact gctgtgtgca tcaacttctg tatcattatg ttgctgaatg tgctctatga
1921 aaaagttgcc ctgcttctga cgaatttaga acagcctcgc acagagtctg agtgggagaa
1981 cagcttcacc ctgaaaatgt ttctttttca gtttgtcaat ctgaacagct ccacatttta
2041 catcgcattc ttcctcggaa gatttacagg acacccaggt gcctacttga ggctgataaa
2101 caggtggaga ctagaagagt gccaccctag tggatgcctt attgatctgt gtatgcaaat
2161 gggtattata atggtgctaa agcagacctg gaataatttc atggaacttg gctacccgtt
2221 aattcagaat tggtggacta gaagaaaagt acgacaagaa catggacctg aaaggaaaat
2281 aagtttccca caatgggaaa aggactataa ccttcagccg atgaatgcct atggactctt
2341 cgatgaatac ttagaaatga ttcttcagtt tggattcaca actatctttg tggcagcttt
2401 tcccctagca ccacttctgg ccttactgaa taacataatt gaaattcgac ttgatgctta
2461 caaatttgtc acacagtgga ggagaccttt agcttcaagg gccaaagaca taggaatttg
2521 gtatggaatt cttgaaggca ttggaattct ctctgttatc acaaatgcat ttgtcatagc
2581 gataacatct gactttatcc ctcgcttggt gtatgcttat aagtatggac cttgtgcagg
2641 ccaaggagaa gctgggcaaa agtgcatggt tggctatgtg aatgccagct tgtctgtatt
2701 tcgaatttct gactttgaga accgatctga gcctgaatct gatggcagtg agttctcggg
2761 gactcctctt aagtactgca gataccggga ctaccgtgac ccgcctcatt cactggtgcc
2821 ctatggctac acactgcagt tttggcatgt cctagctgct cgattagctt ttatcattgt
2881 ctttgagcac ctcgtgtttt gtataaagca cctcatttca tatctgatcc cagacctccc
2941 aaaagaccta agggatcgaa tgagaagaga gaagtacttg attcaggaga tgatgtatga
3001 agcagaactg gaacgtctcc agaaggaacg aaaggagagg aagaagaatg gaaaagcaca
3061 ccacaacgag tggccgtgac cataaaatag tccctttcca ggccaaggac ctgaattctg
3121 tttacttctt ctggctgtgc aaaagcacac tcaagtgaat gactaaaaat gcaaccacag
3181 tgcatgttgc agataccggc ggccgcagga ggggcagcat ccagtagagg actggcgttg
3241 gagtcacact gctgtgaaat cacgttgcag tccagcgcac aattgctatc tatccataga
3301 ccattcttga ccaagcaagc atgcacatta tgggcagtta cattctcaag tttttaaaat
3361 caaggggaac ttgtatactg ggcctgtttt tcagcctgtt tgctaccttt tttgcattct
3421 atcccatgtg aattttacag acactgggct aaaaagggta ttcagacaca tggacacaca
3481 ttcctagaat gtcatcatat ggtcctaatt ccatgtcacc aacaacgcag acaagaccct
3541 gtttacaact ttttctttc
//