LOCUS AK316088 1634 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78987 complete cds, highly similar to
Sorting nexin-10.
ACCESSION AK316088
VERSION AK316088.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1634)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1634
/clone="BRTHA2025049"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000499701"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 235..918
/codon_start=1
/note="highly similar to Sorting nexin-10"
/protein_id="BAH14459.1"
/transl_table=1
/translation="MILMEGIGCMRHSSLTRQPKLPYRSLASARGGLQEFVSVWVRDP
RIQKEDFWHSYIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPEL
PSKNLFFNMNNRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSHLNSEDIEACV
SGQTKYSVEEAIHKFALMNRRFPEEDEEGKKENDIDYDSESSSSGLGHSSDDSSSHGC
KVNTAPQES"
BASE COUNT 489 a 314 c 361 g 470 t
ORIGIN
1 acgtgcgcgg ggagcgcggg gagcgcgggg agcgcggggc tgcgctcgtg tgcgctcctg
61 ggcgctcgcc gccgccgctg ccgccgcgcg cctttgagtc agcaaactcc gcggcccgca
121 agcccggctc ggcccggccc tgctctgttc tgcccggagg agccgcccat tgatcgtgtc
181 ctgtgctgaa gatgtttccg gaacaacaga aagaggcatt tatttattca ttaaatgata
241 ctaatggaag gcattggatg tatgaggcat tcaagtctta caagacagcc taagctgccc
301 tacaggagct tagcgtctgc tagaggaggc ctacaggaat ttgtaagtgt ctgggttcga
361 gatcctagga ttcagaagga ggacttctgg cattcttaca ttgactatga gatatgtatt
421 catactaata gcatgtgttt tacaatgaaa acatcctgtg tacgaagaag atatagagaa
481 ttcgtgtggc tgaggcagag actccaaagt aatgcgttgc tggtacaact gccagaactt
541 ccatctaaaa acctgttttt caacatgaac aatcgccagc acgtggatca gcgtcgccag
601 ggtctggaag atttcctcag aaaagtccta cagaatgcac ttttgctttc agatagcagc
661 cttcacctct tcttacagag ccatctgaat tcagaagaca ttgaggcgtg tgtttctggg
721 cagactaagt actctgtgga agaagcaatt cacaagtttg ccttaatgaa tagacgtttc
781 cctgaagaag atgaagaagg aaaaaaagaa aatgatatag attatgattc agaaagttca
841 tcctctgggc ttggacacag tagtgatgac agcagttcac atggatgtaa agtaaataca
901 gctccgcagg aatcctgaaa aataattcta atgttactat cttaggaata gcaaattatg
961 tccagtcata gagaagaaag cttcataata atacattctt acctaaagct cactgtcatg
1021 atgttaggta tttaaattct taaagatgtt gggttgttta ttagtggtat ttttatgttg
1081 tcttatttta ggtaagcttc tgtgtaaagc taaaaatcct gtgaatacaa tactatcctt
1141 tacaggcaga cattattggt aaacaagatc ttgccctcca atgaaatgac ttacatgttt
1201 taaaaaaccg agttggtttt attgaattta aaaagatagg taactaagta gcatttaaaa
1261 tcaagataga gcattccttc ttgtatcagt ggggcagtgt taccataaac acggtgtata
1321 tgttgttaaa ccctatgaag agtaacagtg tagaccagac tgcctctctc agatatgtgc
1381 ctgatatttt gtggatacct cccctgcact ggcaaaacac tatgcttttg ggtgttagac
1441 tgagatattt taagagtatt taacctttcc agtattctgt ttcacgctta gatggaaatg
1501 tatcttatga atagagacat attaaaataa tgtttacatc ttagaaaaaa catagatagt
1561 gctagtaata ttacttataa ctgtaatata tagattcaga aatacatttt cattatccaa
1621 aatcagcttc aaca
//