LOCUS AK316080 1295 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78979 complete cds, highly similar to
Transmembrane and coiled-coil domains protein 1.
ACCESSION AK316080
VERSION AK316080.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1295)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1295
/clone="BRSTN2014173"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000499693"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 341..871
/codon_start=1
/note="highly similar to Transmembrane and coiled-coil
domains protein 1"
/protein_id="BAH14451.1"
/transl_table=1
/translation="MESIAEFSLVSGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKET
ITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVV
AKLPFTPLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATK
QAGGFLGPPPPSGKFS"
BASE COUNT 336 a 266 c 309 g 384 t
ORIGIN
1 tactcggtgg tggcggagtc tacggaagcc gttttcgctt cacttttcct ggctgtagag
61 cgctttcccc ctggcgggtg agagtgcaga gacgaaggtg cgagatgagc actatgttcg
121 cggacactct cctcatcgtt tttatctctg tgtgcacggc tctgctcgca gagggtgaga
181 gcgggtattt ctcagacgtt tgatcagtcc ccgggaggaa gggccccggg gtcccctgtg
241 ccaccagggg aaagatcgcg agccttactt gcttgagagg ctcatctact ccacttcagg
301 gaatctctgg gcaactcgtg aacaggagca ggaggggagt atggagtcga ttgccgagtt
361 ttctttggtc tcaggcataa cctgggtcct ggtttacagg acagacaagt acaagagact
421 gaaggcagaa gtggaaaaac agagtaaaaa attggaaaag aagaaggaaa caataacaga
481 gtcagctggt cgacaacaga aaaagaaaat agagagacaa gaagagaaac tgaagaataa
541 caacagagat ctatcaatgg ttcgaatgaa atccatgttt gctattggct tttgttttac
601 tgccctaatg ggaatgttca attccatatt tgatggtaga gtggtggcaa agcttccttt
661 tacccctctt tcttacatcc aaggactgtc tcatcgaaat ctgctgggag atgacaccac
721 agactgttcc ttcattttcc tgtatattct ctgtactatg tcgattcgac agaacattca
781 gaagattctc ggccttgccc cttcacgagc cgccaccaag caggcaggtg gatttcttgg
841 cccaccacct ccttctggga agttctcttg aactcaagaa ctctttattt tctatcattc
901 tttctagaca cacacacatc agactggcaa ctgttttgta gcaagagcca taggtagcct
961 tactacttgg gcctctttct agttttgaat tatttctaag ccttttgggt atgattagag
1021 tgaaaatggc agccagcaaa cttgatagtg cttttggtcc tagatgattt ttatcaaata
1081 agtggattga ttagttaagt tcaggtaatg tttatgtaat gaaaaacaaa tagcatcctt
1141 cttgtttcat ttacataagt attttctgtg ggaccgactc tcaaggcact gtgtatgccc
1201 tgcaagttgg ctgtctatga gcatttagag atttagaaga aaaatttagt ttgtttaacc
1261 cttgtaactg tttgttttgt tgttgttttt ttttc
//