LOCUS AK316078 1521 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78977 complete cds, highly similar to Homo
sapiens ARP3 actin-related protein 3 homolog B (yeast) (ACTR3B),
mRNA.
ACCESSION AK316078
VERSION AK316078.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1521)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1521
/clone="BRSTN2005250"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000499691"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 194..1186
/codon_start=1
/note="highly similar to Homo sapiens ARP3 actin-related
protein 3 homolog B (yeast) (ACTR3B), mRNA"
/protein_id="BAH14449.1"
/transl_table=1
/translation="MERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFE
SFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCI
KHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVD
PRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQN
CPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPAE
VQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS"
BASE COUNT 368 a 387 c 413 g 353 t
ORIGIN
1 ggcgacgggg cgctctcggg ctgccggcgg ggccgagcgc cgcgcgtccc gagcatggca
61 ggctccctgc ctccctgcgt ggtggactgt ggcaccgggt ataccaagct tggctacgca
121 ggcaacactg agccccagtt cattattcct tcattggccg atacgacatg gaatcattga
181 agactgggat cttatggaaa ggttcatgga gcaagtggtt tttaaatatc ttcgagctga
241 acctgaggac cattattttt taatgacaga acctccactc aatacaccag aaaacagaga
301 gtatcttgca gaaattatgt ttgaatcatt taacgtacca ggactctaca ttgcagttca
361 ggcagtgctg gccttggcgg catcttggac atctcgacaa gtgggtgaac gtacgttaac
421 ggggatagtc attgacagcg gagatggagt cacccatgtt atcccagtgg cagaaggtta
481 tgtaattgga agctgcatca aacacatccc gattgcaggt agagatatta cgtatttcat
541 tcaacagctg ctaagggaga gggaggtggg aatccctcct gagcagtcac tggagaccgc
601 aaaagccatt aaggagaaat actgttacat ttgccccgat atagtcaagg aatttgccaa
661 gtatgatgtg gatccccgga agtggatcaa acagtacacg ggtatcaatg cgatcaacca
721 gaagaagttt gttatagacg ttggttacga aagattcctg ggacctgaaa tattctttca
781 cccggagttt gccaacccag actttatgga gtccatctca gatgttgttg atgaagtaat
841 acagaactgc cccatcgatg tgcggcgccc gctgtataag aatgtcgtac tctcaggagg
901 ctccaccatg ttcagggatt tcggacgccg actgcagagg gatttgaaga gagtggtgga
961 tgctaggctg aggctcagcg aggagctcag cggcgggagg atcaagccga agcctgcgga
1021 ggtccaggtg gtcacgcatc acatgcagcg ctacgccgtg tggttcggag gctccatgct
1081 ggcctcgact cccgagttct ttcaggtctg ccacaccaag aaggactatg aagagtacgg
1141 gcccagcatc tgccgccaca accccgtctt tggagtcatg tcctagtgtc tgcctgaacg
1201 cgtcgttcga tggtgtcacg ttggggaaca agtgtccttc agaacccaga gaaggccgcc
1261 gttctgtaaa tagcgacgtc ggtgttgctg cccagcagcg tgcttgcatt gccggtgcat
1321 gaggcgcggc gcgggccctt cagtaaaagc catttatccg tgtgccgacc gctgtctgcc
1381 agcctcctcc ttctcccgcc ctcctcaccc tcgctctccc tcctcctcct cctccgagct
1441 gctagctgac aaatacaatt ctgaaggaat ccaaatgtga ctttgaaaat tgttagagaa
1501 aacaacatta gaaaatggcg c
//