LOCUS AK316072 3067 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA, FLJ78971 complete cds, highly similar to Rap guanine nucleotide exchange factor 4. ACCESSION AK316072 VERSION AK316072.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3067) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2008) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3067 /clone="BRHIP3037066" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000499685" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 173..2749 /codon_start=1 /note="highly similar to Rap guanine nucleotide exchange factor 4" /protein_id="BAH14443.1" /transl_table=1 /translation="MAGLLAPPYGVMETGSNNDRIPDKENTPLIEPHVPLRPANTITK VPSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMMQQTPCVHSR TQAVGMWQVLLEDGVLNHVDQEHHFQDKYLFYRFLDDEHEDAPLPTEEEKKECDEELQ DTMLLLSQMGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGV LIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVND APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKVPAGNRAS NQGNSQPQQKYTVMSGTPEKILEHFLETIRLEATLNEATDSVLNDFIMMHCVFMPNTQ LCPALVAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWAAMYGDLLQEDDVSMAFLE EFYVSVSDDARMIAALKEQLPELEKIVKQISEDAKAPQKKHKVLLQQFNTGDERAQKR QPIRGSDEVLFKVYCMDHTYTTIRVPVATSVKEVISAVADKLGSGEGLIIVKMSSGGE KVVLKPNDVSVFTTLTINGRLFACPREQFDSLTPLPEQEGPTVGTVGTFELMSSKDLA YQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCS QLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFY AEFESLMDPSRNHRAYRLTVAKLEPPLIPFMPLLIKDMTFTHEGNKTFIDNLVNFEKM RMIANTARTVRYYRSQPFNPDAAQANKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPR RP" BASE COUNT 901 a 691 c 715 g 760 t ORIGIN 1 agtccagctc tcatacatca ctaagggaga agctgattgc aacttgacca tgtgcctgag 61 tagtcccatc agtgagaaga ggagaacatg gatttaaaaa aaactagaat gtacccctag 121 ggctcctgcc gtggtggacc tgggagaagt gtctggtaaa tatcgacagt atatggcagg 181 acttctggct cctccttatg gtgttatgga aacgggctct aacaatgaca ggattcctga 241 caaggagaac acacctctca ttgaacctca cgttcctctt cgtcctgcta acaccattac 301 caaggtccct tcagagaaga tcctcagagc tggaaaaatt ttacgaaatg ccattctctc 361 tcgagcacct cacatgataa gagatagaaa ataccaccta aagacataca gacaatgctg 421 tgtgggaact gaactggtgg actggatgat gcagcagaca ccatgtgttc actcccggac 481 tcaagctgtt ggcatgtggc aagtcctgtt agaagatggt gttctcaacc acgtggacca 541 ggagcaccat ttccaagaca aatatttatt ctatcgattt ctggatgatg agcacgagga 601 tgcccctttg cctactgagg aggagaagaa ggagtgtgat gaggagctcc aggacaccat 661 gctgctgctg tcacagatgg gccccgacgc ccacatgagg atgatccttc gcaaaccacc 721 tggccagagg actgtggatg acctagagat tatctatgag gagcttcttc atattaaagc 781 cttatcccat ctttctacca cagtgaaacg agagttagca ggtgttctca tttttgagtc 841 tcacgccaaa ggagggactg tgttgtttaa ccagggggaa gaaggtacct cctggtacat 901 tattctaaaa ggatcagtga atgtagtcat ttacggcaag ggtgtggtct gcaccctgca 961 tgaaggagat gacttcggca agttagcact agtgaatgat gccccacgag ctgcctctat 1021 cgtcttacga gaagataact gccatttctt aagagtagac aaggaggatt tcaaccggat 1081 cctaagggac gtggaggcga atacagtcag acttaaagaa catgaccaag atgtcttggt 1141 gctggagaag gtcccagcag ggaacagagc ttctaatcaa ggaaactcac agcctcagca 1201 aaagtatact gtgatgtcag gaacacctga aaaaatttta gagcattttc tagaaacaat 1261 acgccttgag gcaactttaa atgaagcaac agattctgtt ttaaatgact ttattatgat 1321 gcactgtgtt tttatgccaa atacccagct ttgcccggca ctggtggccc actaccacgc 1381 acagccttca caaggtacag aacaggagaa aatggattat gccctcaaca ataagaggcg 1441 agtcatccgc ctggttctac agtgggctgc catgtatgga gacctcctgc aagaggatga 1501 cgtgtctatg gccttcctgg aggagtttta tgtatctgta tcagatgatg cccggatgat 1561 tgctgccctc aaggagcaac tgccagagtt ggagaagatt gtcaagcaaa tctcagaaga 1621 tgcaaaggca ccacaaaaga agcacaaggt tcttttgcaa cagttcaata cgggcgatga 1681 gagagcccag aagcgccagc ctatccgcgg ctctgatgaa gttctgttta aggtctattg 1741 catggaccac acctacacaa ccattcgggt gccagtggcc acttcggtga aggaagtcat 1801 cagtgcagtt gccgacaagc tgggctccgg ggagggcctg atcatagtca agatgagttc 1861 cggaggagaa aaggtggtgc tcaaacctaa tgatgtttca gtatttacga cgctcaccat 1921 taatggacgc ctgtttgctt gcccgcgaga gcaattcgat tcactgactc ccttaccaga 1981 acaggaaggc ccaactgttg gaacagtggg aacttttgaa ctgatgagct ccaaagattt 2041 agcataccag atgacaattt atgattggga actcttcaac tgcgtgcatg agctggagct 2101 aatctatcac acatttggaa ggcataattt taaaaagacc acagcaaact tggatttgtt 2161 cctgaggaga tttaatgaaa ttcagttttg ggtcgtcact gagatctgcc tttgttctca 2221 gctcagcaag cgtgttcagc tattaaaaaa atttattaag atagcagccc actgtaagga 2281 gtataaaaat ctgaattcct tttttgccat cgtcatggga ctaagtaacg ttgctgtgag 2341 ccgcttggca ctaacgtggg agaaactgcc aagcaagttc aagaagttct atgcggagtt 2401 tgaaagttta atggaccctt caaggaacca cagggcctac aggctgacag tagctaagct 2461 ggaacctcct ctcatcccct tcatgccttt gctcattaaa gatatgacat ttactcatga 2521 ggggaacaag acgttcattg acaatctagt aaactttgaa aaaatgcgca tgattgcaaa 2581 tacggccaga acagtgagat actacaggag ccaacccttc aatcctgatg cagctcaagc 2641 taataagaac catcaggatg tccggagtta tgtacggcaa ttaaatgtga ttgacaacca 2701 gagaacttta tcacagatgt cacacagatt agagcctcgt cgaccataga catttcaaat 2761 gcccaaagca acagtttgtc tccagtccac aatctttcaa aaatgccatt tatgctacta 2821 ctgactgtat tgccactaga gaattctaca aaacaagcaa aaacacatcc tgagacacct 2881 cagggctgca ttcagcttac cagctaccta gcaagagaag gaattatttg acatgcctaa 2941 agcttacaca ctctagctta ggaatcccca gtttgtggct accctgtttc atttccactt 3001 gtgccatctt ctttgctgaa gtgttgaata aggcccacgt gaagagtttg gtagaaatag 3061 ccttgtc //