LOCUS AK316058 3279 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78957 complete cds, highly similar to
Protein kinase C-binding protein NELL2 precursor.
ACCESSION AK316058
VERSION AK316058.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3279)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3279
/clone="BRHIP3001342"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000499671"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 373..2973
/codon_start=1
/note="highly similar to Protein kinase C-binding protein
NELL2 precursor"
/protein_id="BAH14429.1"
/transl_table=1
/translation="MGFPPLLKGQASATRSSLASCSWVVFFLSCLSRHAPEIEGGRRW
TELIRTMESRVLLRTFCLIFGLGAVWGLGVDPSLQIDVLTELELGESTTGVRQVPGLH
NGTKAFLFQDTPRSIKASTATAEQFFQKLRNKHEFTILVTLKQTHLNSGVILSIHHLD
HRYLELESSGHRNEVRLHYRSGSHRPHTEVFPYILADDKWHKLSLAISASHLILHIDC
NKIYERVVEKPSTDLPLGTTFWLGQRNNAHGYFKGIMQDVQLLVMPQGFIAQCPDLNR
TCPTCNDFHGLVQKIMELQDILAKTSAKLSRAEQRMNRLDQCYCERTCTMKGTTYREF
ESWIDGCKNCTCLNGTIQCETLICPNPDCPLKSALAYVDGKCCKECKSICQFQGRTYF
EGERNTVYSSSGVCVLYECKDQTMKLVESSGCPALDCPESHQITLSHSCCKVCKGYDF
CSERHNCMENSICRNLNDRAVCSCRDGFRALREDNAYCEDIDECAEGRHYCRENTMCV
NTPGSFMCICKTGYIRIDDYSCTEHDECITNQHNCDENALCFNTVGGHNCVCKPGYTG
NGTTCKAFCKDGCRNGGACIAANVCACPQGFTGPSCETDIDECSDGFVQCDSRANCIN
LPGWYHCECRDGYHDNGMFSPSGESCEDIDECGTGRHSCANDTICFNLDGGYDCRCPH
GKNCTGDCIHDGKVKHNGQIWVLENDRCSVCSCQNGFVMCRRMVCDCENPTVDLFCCP
ECDPRLSSQCLHQNGETLYNSGDTWVQNCQQCRCLQGEVDCWPLPCPDVECEFSILPE
NECCPRCVTDPCQADTIRNDITKTCLDEMNVVRFTGSSWIKHGTECTLCQCKNGHICC
SVDPQCLQEL"
BASE COUNT 831 a 767 c 830 g 851 t
ORIGIN
1 gctcagttcc ccttgccttc tgctgtatgc tggtcccaga gagcccgagt ccgggtctcc
61 acgctttatt tggcaggggg cgcgcgggtt ccggagctgt ccagcacctc ctggccaagt
121 tctctgcgct ctccgcgccc gggaagctct ccgcgccggg gaagctctcc agcgccccgc
181 ccccggcagg gaacctctcc accaggacac ccggggcttc ccaggctcgc catccgtccc
241 caccagtctc tacctacttt gcccagctcc acctcggcag tgcggcgtgt tttggtggcc
301 ttcctccgca cgccctggag ggggagtgcc ctgcaccccg gggctgctcc ggagcccagt
361 gcacgagtgc acatgggctt ccctcctttg cttaaagggc aggcgagcgc tactcgctcc
421 agccttgcct cctgcagctg ggtggtcttt tttctctcct gtctttcaag acacgcgccc
481 gaaatcgagg gagggagacg atggactgag ctgatccgca ccatggagtc tcgggtctta
541 ctgagaacat tctgtttgat cttcggtctc ggagcagttt gggggcttgg tgtggaccct
601 tccctacaga ttgacgtctt aacagagtta gaacttgggg agtccacgac cggagtgcgt
661 caggtcccgg ggctgcataa tgggacgaaa gcctttctct ttcaagatac tcccagaagc
721 ataaaagcat ccactgctac agctgaacag ttttttcaga agctgagaaa taaacatgaa
781 tttactattt tggtgaccct aaaacagacc cacttaaatt caggagttat tctctcaatt
841 caccacttgg atcacaggta cctggaactg gaaagtagtg gccatcggaa tgaagtcaga
901 ctgcattacc gctcaggcag tcaccgccct cacacagaag tgtttcctta cattttggct
961 gatgacaagt ggcacaagct ctccttagcc atcagtgctt cccatttgat tttacacatt
1021 gactgcaata aaatttatga aagggtagta gaaaagccct ccacagactt gcctctaggc
1081 acaacatttt ggctaggaca gagaaataat gcgcatggat attttaaggg tataatgcaa
1141 gatgtccaat tacttgtcat gccccaggga tttattgctc agtgcccaga tcttaatcgc
1201 acctgtccaa cttgcaatga cttccatgga cttgtgcaga aaatcatgga gctacaggat
1261 attttagcca aaacatcagc caagctgtct cgagctgaac agcgaatgaa tagattggat
1321 cagtgctatt gtgaaaggac ttgcaccatg aagggaacca cctaccgaga atttgagtcc
1381 tggatagacg gctgtaagaa ctgcacatgc ctgaatggaa ccatccagtg tgaaactcta
1441 atctgcccaa atcctgactg cccacttaag tcggctcttg cgtatgtgga tggcaaatgc
1501 tgtaaggaat gcaaatcgat atgccaattt caaggacgaa cctactttga aggagaaaga
1561 aatacagtct attcctcttc tggagtatgt gttctctatg agtgcaagga ccagaccatg
1621 aaacttgttg agagttcagg ctgtccagct ttggattgtc cagagtctca tcagataacc
1681 ttgtctcaca gctgttgcaa agtttgtaaa ggttatgact tttgttctga aaggcataac
1741 tgcatggaga attccatctg cagaaatctg aatgacaggg ctgtttgtag ctgtcgagat
1801 ggttttaggg ctcttcgaga ggataatgcc tactgtgaag acatcgatga gtgtgctgaa
1861 gggcgccatt actgtcgtga aaatacaatg tgtgtcaaca ccccgggttc ttttatgtgc
1921 atctgcaaaa ctggatacat cagaattgat gattattcat gtacagaaca tgatgagtgt
1981 atcacaaatc agcacaactg tgatgaaaat gctttatgct tcaacactgt tggaggacac
2041 aactgtgttt gcaagccggg ctatacaggg aatggaacga catgcaaagc attttgcaaa
2101 gatggctgta ggaatggagg agcctgtatt gccgctaatg tgtgtgcctg cccacaaggc
2161 ttcactggac ccagctgtga aacggacatt gatgaatgct ctgatggttt tgttcaatgt
2221 gacagtcgtg ctaattgcat taacctgcct ggatggtacc actgtgagtg cagagatggc
2281 taccatgaca atgggatgtt ttcaccaagt ggagaatcgt gtgaagatat tgatgagtgt
2341 gggaccggga ggcacagctg tgccaatgat accatttgct tcaatttgga tggcggatat
2401 gattgtcgat gtcctcatgg aaagaattgc acaggggact gcatccatga tggaaaagtt
2461 aagcacaatg gtcagatttg ggtgttggaa aatgacaggt gctctgtgtg ctcatgtcag
2521 aatggattcg ttatgtgtcg acggatggtc tgtgactgtg agaatcccac agttgatctt
2581 ttttgctgcc ctgaatgtga cccaaggctt agtagtcagt gcctccatca aaatggggaa
2641 actttgtata acagtggtga cacctgggtc cagaattgtc aacagtgccg ctgcttgcaa
2701 ggggaagttg attgttggcc cctgccttgc ccagatgtgg agtgtgaatt cagcattctc
2761 ccagagaatg agtgctgccc gcgctgtgtc acagaccctt gccaggctga caccatccgc
2821 aatgacatca ccaagacttg cctggacgaa atgaatgtgg ttcgcttcac cgggtcctct
2881 tggatcaaac atggcactga gtgtactctc tgccagtgca agaatggcca catctgttgc
2941 tcagtggatc cacagtgcct tcaggaactg tgaagttaac tgtctcatgg gagatttctg
3001 ttaaaagaat gttctttcat taaaagacca aaaagaagtt aaaacttaaa ttgggtgatt
3061 tgtgggcagc taaatgcagc tttgttaata gctgagtgaa ctttcaatta tgaaatctgt
3121 ggagcttgac aaaatcacaa aaggaaaatt actggggcaa aattagacct caagtctgcc
3181 tctactgtgt ctcacatcac catgtagaag aatgggcgta cagtatatac cgtgacatcc
3241 tgaaccctgg atagaaagcc tgagcccatt ggatctgtg
//