LOCUS AK316035 1892 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78934 complete cds, highly similar to Homo
sapiens glycerophosphodiester phosphodiesterase domain containing
2 (GDPD2), mRNA.
ACCESSION AK316035
VERSION AK316035.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1892)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1892
/clone="BRCAN2028542"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000499648"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 217..1599
/codon_start=1
/note="highly similar to Homo sapiens
glycerophosphodiester phosphodiesterase domain containing
2 (GDPD2), mRNA"
/protein_id="BAH14406.1"
/transl_table=1
/translation="MDWSLAFLLVISLLVTYASLLLVLALLLRLCRQPLHLHSLHKVL
LLLIMLLVAAGLVGLDIQWQQEWHSLRVSLQATAPFLHIGAAAGIALLAWPVADTFYR
IHRRGPKILLLLLFFGVVLVIYLAPLCISSPCIMEPRDLPPKPGLVGHRGAPMLAPEN
TLMSLRKTAECGATVFETDVMVSSDGVPFLMHDEHLSRTTNVASVFPTRITAHSSDFS
WTELKRLNAGSWFLERRPFWGAKPLAGPDQKEAESQTVPALEELLEEAAALNLSIMFD
LRRPPQNHTYYDTFVIQTLETVLNARVPQAMVFWLPDEDRANVQRRAPGMRQIYGRQG
GNRTERPQFLNLPYQDLPLLDIKALHKDNVSVNLFVVNKPWLFSLLWCAGVDSVTTND
CQLLQQMRYPIWLITPQTYLIIWVITNCVSTMLLLWTFLLQRRFVKKRGKTGLETAVL
LTRINNFMME"
BASE COUNT 423 a 513 c 504 g 452 t
ORIGIN
1 aaaaagggag gaggcagacc actcggagag gagctgggaa gcagtgcaga gaggagagcg
61 gagcggagct gccgctgagc aaagtgcgac tgtatctggt ttggcctgct cttcctcacc
121 ttcctccttt ccctgagctg gctgtacatc gggctcgtcc ttctcaatga cctgcacaac
181 ttcaatgaat tcctcttccg ccgctgggga cactggatgg actggtccct ggcattcctg
241 ctggtcatct ctctactggt cacatatgca tccttgctat tggtcctggc cctgctcctg
301 cggctttgta gacagcccct gcatctgcac agcctccaca aggtgctgct gctcctcatt
361 atgctgcttg tggcggctgg ccttgtggga ctggacatcc aatggcagca ggagtggcat
421 agcttgcgtg tgtcactgca ggccacagcc ccattccttc atattggagc agccgctgga
481 attgccctcc tggcctggcc tgtggctgat accttctacc gtatccaccg aagaggtccc
541 aagattctgc tactgctcct attttttgga gttgtcctgg tcatctactt ggccccccta
601 tgcatctcct caccctgcat catggaaccc agagacttac cacccaagcc tgggctggtg
661 ggacaccgag gggcccccat gctggctccc gagaacaccc tgatgtcctt gcggaagaca
721 gctgaatgcg gagctactgt gtttgagact gatgtgatgg tcagctccga tggggtcccc
781 ttcctcatgc atgatgagca cctcagcagg accacgaatg tagcctctgt attcccaacc
841 cgaatcacag cccacagcag tgacttctcc tggactgaac tgaagagact caatgctgga
901 tcctggttcc tagagaggcg acccttctgg ggggccaaac cgctggcagg ccctgatcag
961 aaagaggctg agagtcagac ggtaccagca ttagaagagc tattggagga agctgcagcc
1021 ctcaaccttt ccatcatgtt cgacttgcgc cgacccccac agaaccacac atactatgac
1081 acttttgtga tccagacatt ggagactgtg ctgaatgcaa gggtgcccca agccatggtc
1141 ttttggctac cagatgaaga tcgggctaat gtccaacgac gggcacctgg aatgcgccag
1201 atatatggac gtcagggagg caacagaacg gagaggcccc agtttcttaa cctcccctat
1261 caagatctgc cactattgga tatcaaggca ttgcataagg ataatgtctc ggtgaaccta
1321 tttgtagtga acaagccctg gctcttctct ctgctttggt gtgcaggggt ggattcggtc
1381 accaccaacg actgccagct gctgcagcag atgcgttacc ctatctggct tattacccct
1441 caaacctacc taatcatatg ggtcattacc aattgtgttt ccaccatgct gcttttgtgg
1501 accttcctcc tccaaaggag atttgttaag aagagaggga aaactggctt agaaacagca
1561 gtgctgctga caaggatcaa caatttcatg atggagtgaa tgccctgccc tgcttcccca
1621 cccaagccag tctacattgc ccaaacagca agggttggag agtggcttaa gtggaatgct
1681 tcaggggtgg tgggttgcaa gtggggggag ctttgccaac aggaggtttt gaaccatgag
1741 ggccctctgc ccaggtgatg ggcattccct aagctgctat ggaatctgct ccctttgggg
1801 ttttgacctg agatgtttgg gaagagagtg agtaatgaga agtttctcct caaatgaaac
1861 tagaacagag gaagtaaaag ggagattgct cg
//