LOCUS AK316033 1848 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78932 complete cds, highly similar to
Squalene synthetase (EC 2.5.1.21).
ACCESSION AK316033
VERSION AK316033.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1848)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1848
/clone="BRCAN2018509"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000499646"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 436..1497
/codon_start=1
/note="highly similar to Squalene synthetase (EC
2.5.1.21)"
/protein_id="BAH14404.1"
/transl_table=1
/translation="MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPD
WRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQ
EWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQ
QGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRN
QSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQ
YMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMPLAALSW
QYLTTLSQVTEDYVQTGEH"
BASE COUNT 468 a 437 c 450 g 493 t
ORIGIN
1 caggttgcgc tccccgtttc gtcccctccg tgagcatcgg cgcttaccgg tattttaacc
61 cgagggttac acatctgagg caatgtgggt gggttacgcg ggagaggacg agtgagtttt
121 ttggtaagcg gaatgaacta tgcagataac atcacatgaa ggccgtttct ggaatgaagt
181 ctgactcctc cagtttcacc acctcttccg gagctctccc cgccttgctg tcttccatcg
241 cttcatcctc ggtgcttcct gagttttaaa atcgcctatc tacgcttcca agttccaatg
301 agttatctaa cgtctatgga ttagctaggt ggttggtgga aggactcgct cagcagcagc
361 ctgaaaactt gctacaagta tctcaatcag accagtcgca gtttcgcagc tgttatccag
421 gcgctggatg gggaaatgcg caacgcagtg tgcatatttt atctggttct ccgagctctg
481 gacacactgg aagatgacat gaccatcagt gtggaaaaga aggtcccgct gttacacaac
541 tttcactctt tcctttacca accagactgg cggttcatgg agagcaagga gaaggatcgc
601 caggtgctgg aggacttccc aacgatctcc cttgagttta gaaatctggc tgagaaatac
661 caaacagtga ttgccgacat ttgccggaga atgggcattg ggatggcaga gtttttggat
721 aagcatgtga cctctgaaca ggagtgggac aagtactgcc actatgttgc cgggctggtc
781 ggaattggcc tttcccgtct tttctcagcc tcagagtttg aagacccctt agttggtgaa
841 gatacagaac gtgccaactc tatgggcctg tttctgcaga aaacaaacat catccgtgac
901 tatctggaag accagcaagg aggaagagag ttctggcctc aagaggtttg gagcaggtat
961 gttaagaagt taggggattt tgctaagccg gagaatattg acttggccgt gcagtgcctg
1021 aatgaactta taaccaatgc actgcaccac atcccagatg tcatcaccta cctttcgaga
1081 ctcagaaacc agagtgtgtt taacttctgt gctattccac aggtgatggc cattgccact
1141 ttggctgcct gttataataa ccagcaggtg ttcaaagggg cagtgaagat tcggaaaggg
1201 caagcagtga ccctgatgat ggatgccacc aatatgccag ctgtcaaagc catcatatat
1261 cagtatatgg aagagattta tcatagaatc cccgactcag acccatcttc tagcaaaaca
1321 aggcagatca tctccaccat ccggacgcag aatcttccca actgtcagct gatttcccga
1381 agccactact cccccatcta cctgtcgttt gtcatgcctt tggctgccct gagctggcag
1441 tacctgacca ctctctccca ggtaacagaa gactatgttc agactggaga acactgatcc
1501 caaatttgtc catagctgaa gtccaccata aagtggattt actttttttc tttaaggatg
1561 gatgttgtgt tctctttatt tttttcctac tactttaatc cctaaaagaa cgctgtgtgg
1621 ctgggacctt taggaaagtg aaatgcaggt gagaagaacc taaacatgaa aggaaagggt
1681 gcctcatccc agcaacctgt ccttgtgggt gatgatcact gtgctgcttg cggctcatgg
1741 cagagcattc agtgccacgg tttaggtgaa gtcgctgcat atgtgactgt catgagatcc
1801 tacttagtat gatcctggct agaatgataa ttaaaagtat ttaatttg
//