LOCUS AK316014 3229 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA, FLJ78913 complete cds, highly similar to Rap guanine nucleotide exchange factor 4. ACCESSION AK316014 VERSION AK316014.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3229) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2008) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3229 /clone="BRAWH3029225" /clone_lib="BRAWH3" /db_xref="H-InvDB:HIT000499627" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 241..2817 /codon_start=1 /note="highly similar to Rap guanine nucleotide exchange factor 4" /protein_id="BAH14385.1" /transl_table=1 /translation="MAGLLAPPYGVMETGSNNDRIPDKENTPLIEPHVPLRPANTITK VPSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMMQQTPCVHSR TQAVGMWQVLLEDGVLNHVDQEHHFQDKYLFYRFLDDEHEDAPLPTEEEKKECDEELQ DTMLLLSQMGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGV LIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGRLALVND APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKVPAGNRAS NQGNSQPQQKYTVMSGTPEKILEHFLETIRLEATLNEATDSVLNDFIMMHCVFMPNTQ LCPALVAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWAAMYGDLLQEDDVSMAFLE EFYVSVSDDARMIAALKEQLPELEKIVKQISEDAKAPQKKHKVLLQQFNTGDERAQKR QPIRGSDEVLFKVYCMDHTYTTIRVPVATSVKEVISAVADKLGSGEGLIIVKMSSGGE KVVLKPNDVSVFTTLTINGRLFACPREQFDSLTPLPEQEGPTVGTVGTFELMSSKDLA YQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCS QLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFY AEFESLMDPSRNHRAYRLTVAKLEPPLIPFMPLLIKDMTFTHEGNKTFIDNLVNFEKM RMIANTARTVRYYRSQPFNPDAAQANKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPR RP" BASE COUNT 963 a 712 c 750 g 804 t ORIGIN 1 aaaagaaagg taggatgcat acgcagaaac attagtgcta atatgctgca gaaaagccaa 61 gataaatcag tccagctctc atacatcact aagggagaag ctgattgcaa cttgaccatg 121 tgcctgagta gtcccatcag tgagaagagg agaacatgga tttaaaaaaa actagaatgt 181 acccctaggg ctcctgccgt ggtggacctg ggagaagtgt ctggtaaata tcgacagtat 241 atggcaggac ttctggctcc tccttatggt gttatggaaa cgggctctaa caatgacagg 301 attcctgaca aggagaacac acctctcatt gaacctcacg ttcctcttcg tcctgctaac 361 accattacca aggtcccttc agagaagatc ctcagagctg gaaaaatttt acgaaatgcc 421 attctctctc gagcacctca catgataaga gatagaaaat accacctaaa gacatacaga 481 caatgctgtg tgggaactga actggtggac tggatgatgc agcagacacc atgtgttcac 541 tcccggactc aagctgttgg catgtggcaa gtcctgttag aagatggtgt tctcaaccac 601 gtggaccagg agcaccattt ccaagacaaa tatttattct atcgatttct ggatgatgag 661 cacgaggatg cccctttgcc tactgaggag gagaagaagg agtgtgatga ggagctccag 721 gacaccatgc tgctgctgtc acagatgggc cccgacgccc acatgaggat gatccttcgc 781 aaaccacctg gccagaggac tgtggatgac ctagagatta tctatgagga gcttcttcat 841 attaaagcct tatcccatct ttctaccaca gtaaaacgag agttagcagg tgttctcatt 901 tttgagtctc acgccaaagg agggactgtg ttgtttaacc agggggaaga aggtacctcc 961 tggtacatta ttctaaaagg atcagtgaat gtagtcattt acggcaaggg tgtggtctgc 1021 accctgcatg aaggagatga cttcggcagg ttagcactag tgaatgatgc cccacgagct 1081 gcctctatcg tcttacgaga agataactgc catttcttaa gagtagacaa ggaggatttc 1141 aaccggatcc taagggacgt ggaggcgaat acagtcagac ttaaagaaca tgaccaagat 1201 gtcttggtgc tggagaaggt cccagcaggg aacagagctt ctaatcaagg aaactcacag 1261 cctcagcaaa agtatactgt gatgtcagga acacctgaaa aaattttaga gcattttcta 1321 gaaacaatac gccttgaggc aactttaaat gaagcaacag attctgtttt aaatgacttt 1381 attatgatgc actgtgtttt tatgccaaat acccagcttt gcccggcact ggtggcccac 1441 taccacgcac agccttcaca aggtacagaa caggagaaaa tggattatgc cctcaacaat 1501 aagaggcgag tcatccgcct ggttctacag tgggctgcca tgtatggaga cctcctgcaa 1561 gaggatgacg tgtctatggc cttcctggag gagttttatg tatctgtatc agatgatgcc 1621 cggatgattg ctgccctcaa ggagcaactg ccagagttgg agaagattgt caagcaaatc 1681 tcagaagatg caaaggcacc acaaaagaag cacaaggttc ttttgcaaca gttcaatacg 1741 ggcgatgaga gagcccagaa gcgccagcct atccgcggct ctgatgaagt tctgtttaag 1801 gtctattgta tggaccacac ctacacaacc attcgggtgc cagtggccac ttcggtgaag 1861 gaagtcatca gtgcagttgc cgacaagctg ggctccgggg agggcctgat catagtcaag 1921 atgagttccg gaggagaaaa ggtggtgctc aaacctaatg atgtttcagt atttacgacg 1981 ctcaccatta atggacgcct gtttgcttgc ccgcgagagc aattcgattc actgactccc 2041 ttaccagaac aggaaggccc aactgttgga acagtgggaa cttttgaact gatgagctcc 2101 aaagatttag cataccagat gacaatttat gattgggaac tcttcaactg cgtgcatgag 2161 ctggagctaa tctatcacac atttggaagg cataatttta aaaagaccac agcaaacttg 2221 gatttgttcc tgaggagatt taatgaaatt cagttttggg tcgtcactga gatctgcctt 2281 tgttctcagc tcagcaagcg tgttcagcta ttaaaaaaat ttattaagat agcagcccac 2341 tgtaaggagt ataaaaatct gaattccttt tttgccatcg tcatgggact aagtaacgtt 2401 gctgtgagcc gcttggcact aacgtgggag aaactgccaa gcaagttcaa gaagttctat 2461 gcggagtttg aaagtttaat ggacccttca aggaaccaca gggcctacag gctgacagta 2521 gctaagctgg aacctcctct catccccttc atgcctttgc tcattaaaga tatgacattt 2581 actcatgagg ggaacaagac gttcattgac aatctagtaa actttgaaaa aatgcgcatg 2641 attgcaaata cggccagaac agtgagatac tacaggagcc aacccttcaa tcctgatgca 2701 gctcaagcta ataagaacca tcaggatgtc cggagttatg tacggcaatt aaatgtgatt 2761 gacaaccaga gaactttatc acagatgtca cacagattag agcctcgtcg accatagaca 2821 tttcaaatgc ccaaagcaac agtttgtctc cagtccacaa tctttcaaaa attccattta 2881 tgctactact gactgtattg ccactagaga attctacaaa acaagcaaaa acacatcctg 2941 agacacctca gggctgcatt cagcttacca gctacctagc aagagaagga attatttgac 3001 atgcctaaag cttacacact ctagcttagg aatccccagt ttgtggctac cctgtttcat 3061 ttccacttgt gccatcttct ttgctgaagt gttgaataag gcccacgtga agagtttggt 3121 agaaatagcc ttgtcaagag aactagcaag cccctgacat ttttttctaa gagtgtttat 3181 gggatgagat gtgctacaaa tgggatagat ttggataaaa ttttaactc //