LOCUS AK315993 1773 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78892 complete cds, highly similar to
Squalene synthetase (EC 2.5.1.21).
ACCESSION AK315993
VERSION AK315993.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1773)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1773
/clone="BRAWH2004204"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000499606"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 482..1543
/codon_start=1
/note="highly similar to Squalene synthetase (EC
2.5.1.21)"
/protein_id="BAH14364.1"
/transl_table=1
/translation="MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPD
WRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQ
EWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQ
QGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRN
QSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQ
YMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSW
QYLTTLSQVTEDYVQTGEH"
BASE COUNT 446 a 441 c 441 g 445 t
ORIGIN
1 gaagcaccta ctccacaggt ccagccggcc ggtgagcgcc tggggaccgc agaggtgaga
61 gtcgcgcccg ggagtccgcc gcctgcgcca ggatggagtt cgtgaaatgc cttggccacc
121 ccgaagagtt ctacaacctg gtgcgcttcc ggatcggggg caagcggaag gtgatgccca
181 agatggacca gataacatca catgaaggcc gtttctggaa tgaagtctga ctcctccagt
241 ttcaccacct cttccggagc tctccccgcc ttgctgcctt ccatcgcttc atcctcggtg
301 cttcctgagt tttaaaatcg cctatctacg cttccaagtt ccaatgagtt atctaacgtc
361 tatggattag ctaggtggtt ggtggaagga ctcgctcagc agcagcctga aaacttgcta
421 caagtatctc aatcagacca gtcgcagttt cgcagctgtt atccaggcgc tggatgggga
481 aatgcgcaac gcagtgtgca tattttatct ggttctccga gctctggaca cactggaaga
541 tgacatgacc atcagtgtgg aaaagaaggt cccgctgtta cacaactttc actctttcct
601 ttaccaacca gactggcggt tcatggagag caaggagaag gatcgccagg tgctggagga
661 cttcccaacg atctcccttg agtttagaaa tctggctgag aaataccaaa cagtgattgc
721 cgacatttgc cggagaatgg gcattgggat ggcagagttt ttggataagc atgtgacctc
781 tgaacaggag tgggacaagt actgccacta tgttgctggg ctggtcggaa ttggcctttc
841 ccgtcttttc tcagcctcag agtttgaaga ccccttagtt ggtgaagata cagaacgtgc
901 caactctatg ggcctgtttc tgcagaaaac aaacatcatc cgtgactatc tggaagacca
961 gcaaggagga agagagttct ggcctcaaga ggtttggagc aggtatgtta agaagttagg
1021 ggattttgct aagccggaga atattgactt ggccgtgcag tgcctgaatg aacttataac
1081 caatgcactg caccacatcc cagatgtcat cacctacctt tcgagactca gaaaccagag
1141 tgtgtttaac ttctgtgcta ttccacaggt gatggccatt gccactttgg ctgcctgtta
1201 taataaccag caggtgttca aaggggcagt gaagattcgg aaagggcaag cagtgaccct
1261 gatgatggat gccaccaata tgccagctgt caaagccatc atatatcagt atatggaaga
1321 gatttatcat agaatccccg actcagaccc atcttctagc aaaacaaggc agatcatctc
1381 caccatccgg acgcagaatc ttcccaactg tcagctgatt tcccgaagcc actactcccc
1441 catctacctg tcgtttgtca tgcttttggc tgccctgagc tggcagtacc tgaccactct
1501 ctcccaggta acagaagact atgttcagac tggagaacac tgatcccaaa tttgtccata
1561 gctgaagtcc accataaagt ggatttactt tttttcttta aggatggatg ttgtgttctc
1621 tttatttttt tcctactact ttaatcccta aaagaacgct gtgtggctgg gacctttagg
1681 aaagtgaaat gcaggtgaga agaacctaaa catgaaagga aagggtgcct catcccagca
1741 acctgtcctt gtgggtgatg atcactgtgc tgc
//