LOCUS AK315969 3021 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78868 partial cds, highly similar to Guanine
nucleotide exchange factor DBS.
ACCESSION AK315969
VERSION AK315969.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3021)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3021
/clone="BRAMY2032628"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000499582"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 160..>3021
/codon_start=1
/note="highly similar to Guanine nucleotide exchange
factor DBS"
/protein_id="BAH14340.1"
/transl_table=1
/translation="MRFWLRTEEMALEEMVQRLNAVSKHTDEIMHQDIVPLCAADIQD
QLKKRFAYLSGGRGQDGSPVITFPDYPAFSEIPDKEFQNVMTYLTSIPSLQDAGIGFI
LVIDRRRDKWTSVKASVLRIAASFPANLQLVLVLRPTGFFQRTLSDIAFKFNRDDFKM
KVPVIMLSSVPDLHGYIDKSQLTEDLGGTLDYCHSRWLCQRTAIESFALMVKQTAQML
QSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDLRLALKEGHSVLESLRELQAEG
SEPSVNQDQLDNQATVQRLLAQLNETEAAFDEFWAKHQQKLEQCLQLRHFEQGFREVK
AILDAASQKIATFTDIGNSLAHVEHLLRDLASFEEKSGVAVERARALSLDGEQLIGNK
HYAVDSIRPKCQELRHLCDQFSAEIARRRGLLSKSLELHRRLETSMKWCDEGIYLLAS
QPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNAIYKEYESILNQDLMEHVRKVFQ
KQASMEEVFHRRQASLKKLAARQTRPVQPVAPRPEALAKSPCPSPGIRRGSENSSSEG
GALRRGPYRRAKSEMSESRQGRGSAGEEEESLAILRRHVMSELLDTERAYVEELLCVL
EGYAAEMDNPLMAHLLSTGLHNKKDVLFGNMEEIYHFHNRIFLRELENYTDCPELVGR
CFLERMEDFQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQR
ITKYQLLLKEMLKYSRNCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLGDLG
KLLMQGSFSVWTDHKRGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAP
SYSYKQSLNMAAVGITENVKGDAKKFEIWYNAREEVYIVQAPTPEIKAAWVNEIRKVL
TSQLQACREASQHRALEQSQSLPLPAPTSTSPSRGNSRNI"
BASE COUNT 711 a 856 c 938 g 516 t
ORIGIN
1 caatcctggg cagggaggcg gcggctggag gctgaaagcg ctgccgtggc cccctccccg
61 cctccgccgc gccccctccg cactcgcacg gccccacccg caggcgcccc ccgtgcggag
121 gaagcggatc tgccaggatc atttttgttg tgtcggagga tgaggttttg gctgaggact
181 gaagagatgg ccttggaaga aatggtgcag agattaaatg cggtttccaa gcacacggat
241 gaaatcatgc accaggacat cgtcccgctc tgtgctgccg acatccagga ccagctaaag
301 aagcgctttg cttacctgtc cggtgggcgg gggcaggacg gaagcccggt tatcaccttc
361 cctgactacc cggccttcag cgagattccg gacaaggagt tccagaatgt catgacctac
421 ctcaccagca tccccagcct gcaggacgct ggcatcggat tcatcctggt gatagaccgg
481 cgacgggaca aatggacctc cgtgaaggcg tccgtcctgc gcatcgcagc atctttcccg
541 gcaaacctgc agctcgtcct cgtgcttcgc ccgacgggtt ttttccaaag gactctctcc
601 gacatcgctt tcaaattcaa tagagatgac tttaagatga aggtgccggt cataatgctg
661 agctccgtac cagacttaca cggttacatc gataagtcgc agctgaccga ggacctgggt
721 gggaccctgg actactgcca ctcccggtgg ctgtgccagc gcacggccat cgaaagtttc
781 gccctcatgg tgaagcagac ggctcagatg ctgcagtcct tcgggaccga gctggctgaa
841 acagagctgc ccaatgacgt ccagtcgaca agctcagtgc tgtgtgcgca cacagagaag
901 aaggacaagg cgaaggagga tttgaggctg gcactgaaag aggggcacag tgtcctggag
961 agcctcaggg agctgcaggc tgagggctca gagcccagtg tgaaccagga ccagcttgac
1021 aaccaggcca ccgtgcagag gctcctggcc cagctgaacg aaaccgaggc tgccttcgat
1081 gagttctggg caaagcatca gcagaaactg gagcagtgtc tgcagctccg gcactttgag
1141 cagggcttcc gggaggtcaa agccatcttg gacgcagcat cccagaagat agcaaccttc
1201 acagacatcg gcaacagcct ggcgcatgtg gagcacctgc tgagggacct ggccagcttc
1261 gaggagaaat caggcgtggc cgtggagagg gcccgggccc tgtctctgga cggcgagcag
1321 ctcattggga acaagcacta cgcggtagac tccatccgcc caaagtgcca ggagctccgg
1381 cacctctgtg accagttctc tgcggagatc gcaaggagga gggggctgct cagcaagtcc
1441 ctggagctgc accgccgcct ggagacgtcc atgaagtggt gtgatgaagg gatttacctg
1501 ctggcctcac aacctgtgga caagtgccag tcccaggacg gcgcggaggc tgccctccag
1561 gaaatcgaga agtttttgga gaccggtgcg gaaaataaga tccaggagct caacgcgatt
1621 tacaaggaat acgaatccat cctcaaccaa gatctcatgg agcacgtgcg aaaggtcttc
1681 cagaagcagg caagcatgga ggaggtgttc caccgcaggc aggccagcct gaagaagctg
1741 gcggccaggc agacgcggcc cgtgcagccg gtggccccca gacccgaggc actggcaaag
1801 tcgccctgcc cctccccagg cattcggcga ggctctgaga actccagctc cgagggcggt
1861 gcgctccgga gagggcccta tcggagggcc aagagtgaga tgagtgagag ccggcagggc
1921 cgcggctcag cgggggagga ggaggaaagc ctggccatcc tgcgcaggca cgtgatgagc
1981 gagctcctgg acacagaacg ggcctacgtg gaggagctgc tgtgcgtcct ggagggctac
2041 gccgcggaga tggataaccc actgatggct cacctcctgt caacaggcct tcacaacaag
2101 aaggatgttt tgtttggaaa catggaggaa atctatcact tccacaacag gatattcctc
2161 agggagctgg aaaactacac tgactgccca gaactggttg gaagatgctt tctggagagg
2221 atggaagatt tccagatcta tgagaagtac tgtcagaaca agccccgctc tgagagcctg
2281 tggagacagt gctccgactg cccgtttttc caggaatgcc agagaaagct ggaccacaag
2341 ctgagcctgg actcctacct gctgaagcca gtgcagagga tcaccaagta ccagctgctg
2401 ctcaaggaaa tgctgaaata cagcaggaac tgcgaggggg ctgaggacct gcaggaggcg
2461 ctgagctcca tcctgggcat cctgaaggcc gtgaacgact ccatgcacct catcgctatc
2521 accggctatg acgggaatct cggcgacctg ggcaagctgc tgatgcaggg ctcgttcagc
2581 gtctggaccg accacaagag gggccacacc aaggtgaagg agctggccag gttcaagccc
2641 atgcagcggc acctgttcct gcacgagaag gcagtgctct tctgcaagaa gagggaggag
2701 aatggggagg ggtatgagaa agctccctcc tacagctaca agcagtcctt aaacatggct
2761 gccgttggca ttacggagaa cgtgaaggga gatgctaaga agttcgagat ctggtacaac
2821 gcgcgcgagg aggtctacat cgtccaggcg ccaactcctg agattaaagc cgcgtgggtg
2881 aatgaaattc ggaaagtgct gaccagccag ctgcaggctt gtagagaagc cagccagcac
2941 cgggcgctgg agcagtcaca gagcctgccc ctgccggccc cgaccagcac cagtccctca
3001 agaggaaact caaggaacat c
//