LOCUS AK315954 1628 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78853 complete cds, highly similar to Homo
sapiens E2a-Pbx1-associated protein (EB-1), transcript variant 2,
mRNA.
ACCESSION AK315954
VERSION AK315954.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1628)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1628
/clone="BRAMY2009974"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000499567"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 327..1199
/codon_start=1
/note="highly similar to Homo sapiens E2a-Pbx1-associated
protein (EB-1), transcript variant 2, mRNA"
/protein_id="BAH14325.1"
/transl_table=1
/translation="MQGDARRRRNENYFDDIPRSKLERQMAQSSVCEIWTNQNAGFPF
SAIHQVHNTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLI
KELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEI
RNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQL
ALQARKGGHSSTLPESFENKPSKPIPKPRVSIRKSVQIDPSEQKTLANLPWIVEPGQE
AKRGINTKYETTIF"
BASE COUNT 449 a 441 c 365 g 373 t
ORIGIN
1 agaaagatgc acagaggcaa cggctagggg agcggaggtt caagccacat gtctgcgccc
61 tcgggggcca gagcccgcca gccctcgcgg atcccggctc gcggccagcc cgagcggctc
121 gggttttaaa aatcaatttg attggccaca ggaaacgtat tttggcatct ctgggagaca
181 ggctgcacga cgatccccca cagaagcccc ctcggtccat caccctcagg gaacccagtg
241 gtaatcacac tcctcctcag ttgtctccat cacttagcca aagcacttac accactggtg
301 gctccctaga cgttcctcac attatcatgc agggcgatgc aaggaggaga agaaatgaaa
361 actactttga tgatattccc cgatcaaaac tggagaggca gatggctcag tcgtctgtct
421 gtgaaatatg gacgaatcag aacgcaggat ttcctttctc agcgatccat caggttcata
481 atacaggaga ctggggagaa ccttccatta ccttgcgacc tccgaatgaa gccacagcct
541 ctaccccggt acagtactgg cagcatcacc cagaaaagct tatcttccag tcgtgtgatt
601 acaaagcttt ttatttaggt tctatgctga taaaagagct tagggggaca gaatcaaccc
661 aagatgcttg tgcaaaaatg cgggctaact gtcagaagtc tacagagcaa atgaagaagg
721 tccctactat tattctttct gtctcatata aaggagtcaa atttattgat gcaacaaata
781 agaacataat tgctgagcat gaaattcgta atatctcctg tgctgcccag gacccagaag
841 acctctcaac atttgcctat atcacaaaag atttgaagtc taatcaccac tactgtcatg
901 tgtttactgc ctttgatgtg aatttagcct atgaaatcat cctaaccctg ggacaggcat
961 tcgaagtcgc ttaccagcta gcactacaag caagaaaagg gggacactcc tccacacttc
1021 cagaaagctt tgaaaacaaa ccctccaaac ccatccccaa gccccgcgtt agcattcgca
1081 agtccgtgca gatcgaccca tctgagcaaa agactctggc caatctaccg tggattgtgg
1141 agccgggcca agaagccaag aggggcatta ataccaagta tgaaaccacg attttctgat
1201 actcgccgtc ctcctgtcct cgcggtgcct tgctcgccaa gcggtcccgg agcaggcttt
1261 ccttcgcgcc tccgcgtcca cccagcccag gaggaagact gctctgagcg tgcggccttg
1321 ttacgggcga aaggccactg gccattcctg gggaagttct ttctgcacca gtgatggaaa
1381 acgcaagact ttccagtcgc aacccctgag aggcgtgagt tgagatgggt tttccctgat
1441 gctcccgact cccctcccca ccacctccca aggtatttct gatgactccg ccccagtact
1501 tgctttgctt catttgggga aaataatacc ttttctttaa aaaaaaaaaa aaaaaaaaaa
1561 agtaaagggg atctctaata ctgcctaaaa gtatgctttc actgtcagca gttttaaagg
1621 tgaaatca
//