LOCUS AK315939 1123 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78838 complete cds, highly similar to
Protein neurobeachin.
ACCESSION AK315939
VERSION AK315939.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1123)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1123
/clone="BRACE3037575"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000499552"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 123..1094
/codon_start=1
/note="highly similar to Protein neurobeachin"
/protein_id="BAH14310.1"
/transl_table=1
/translation="MFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVV
YSLPQVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQRREISNFEYLMFLNTIAGR
TYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWED
DQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQ
RDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPPWAKKPEDFVRINRM
ALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLG"
BASE COUNT 333 a 236 c 245 g 309 t
ORIGIN
1 aaactaaagg taggaggctg ctgccggcgg aaaaccactc aggccaccta gacagtttgg
61 aaatcaagag gaatctctca gctttggttc ttgcatacac tgagggactt cacggaaaat
121 ggatgttcag cgagatacga gctgtatttt caagacgtta ccttctacaa aacactgctt
181 tggaagtatt tatggcaaac cgaacctcag ttatgtttaa tttccctgat caagcaacag
241 taaaaaaagt tgtctatagc ttgcctcagg ttggagtagg gaccagctat ggtctgccac
301 aagccaggag gatatcattg gccactcctc gacagcttta taaatcttcc aatatgactc
361 agcgctggca aagaagggaa atttcaaact tcgaatattt gatgttcctt aatactattg
421 caggacggac atataatgat ctgaaccaat atccagtgtt tccgtgggtg ttaaccaact
481 atgaatcaga agagttggac ctgactcttc caggaaactt cagggatcta tcaaagccaa
541 ttggtgcttt gaaccccaag agagctgtgt tttatgcaga gcgttatgag acatgggaag
601 atgatcaaag cccaccctac cattataata cccattattc aacagcaaca tctactttat
661 cctggcttgt tcgaattgaa cctttcacaa ccttcttcct caatgcaaat gatggaaaat
721 ttgatcatcc agatcgaacc ttctcatccg ttgcaaggtc ttggagaact agtcagagag
781 atacttctga tgtaaaggaa ctaattccag agttctacta cctaccagag atgtttgtca
841 acagtaatgg atataatctt ggagtcagag aagatgaagt agtggtaaat gatgttgatc
901 ttcccccttg ggcaaaaaaa cctgaagact ttgtgcggat caacaggatg gccctagaaa
961 gtgaatttgt ttcttgccaa cttcatcagt ggatcgacct tatatttggc tataagcagc
1021 gaggaccaga agcagttcgt gctctgaatg tttttcacta cttgacttat gaaggctctg
1081 tgaacctggg atagtatcac tgatcctgtg ctcagggagg ccg
//