LOCUS AK315932 1711 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ78831 complete cds, highly similar to Homo
sapiens armadillo repeat containing 8 (ARMC8), transcript variant
2, mRNA.
ACCESSION AK315932
VERSION AK315932.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1711)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1711
/clone="BRACE3013042"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000499545"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 196..1602
/codon_start=1
/note="highly similar to Homo sapiens armadillo repeat
containing 8 (ARMC8), transcript variant 2, mRNA"
/protein_id="BAH14303.1"
/transl_table=1
/translation="MQALKCFSVLAFENPQVSMTLVNVLVDGELLPQIFVKMLQRDKP
IEMQLTSAKCLTYMCRAGAIRTDDNCIVLKTLPCLVRMCSKERLLEERVEGAETLAYL
IEPDVELQRIASITDHLIAMLADYFKYPSSVSAITDIKRLDHDLKHAHELRQAAFKLY
ASLGANDEDIRKKIIETENMMDRIVTGLSESSVKVRLAAVRCLHSLSRSVQQLRTSFQ
DHAVWKPLMKVLQNAPDEILVVASSMLCNLLLEFSPSKEPILESGAVELLCGLTQSEN
PALRVNGIWALMNMAFQAEQKIKADILRSLSTEQLFRLLSDSDLNVLMKTLGLLRNLL
STRPHIDKIMSTHGKQIMQAVTLILEGEHNIEVKEQTLCILANIADGTTAKDLIMTND
DILQKIKYYMGHSHVKLQLAAMFCISNLIWNEEEGSQERQDKLRDMGIVDILHKLSQS
PDSNLCDKAKMALQQYLA"
BASE COUNT 514 a 351 c 371 g 475 t
ORIGIN
1 ttattgcaag gactactgtc cccagacctg aagtttattg aagcttgcct ccgatgcctg
61 cgtaccatct tcaccagtcc tgtcactcca gaggagctac tgtatacagg gccagatcat
121 caaacaattt tatttaacca cggtgcagtt cagaatattg ctcacctact aacctcactg
181 tcctacaaag ttcgaatgca agcactgaaa tgtttctcag ttttagcttt tgaaaacccc
241 caggtatcga tgaccctggt aaatgttttg gttgatggag aattgttacc acagattttt
301 gtgaagatgt tacagaggga taagcctatt gagatgcagc tcacatcagc aaaatgttta
361 acttacatgt gtagagctgg agcaattcgg acagatgata actgtattgt attaaagaca
421 ttaccttgtt tggttcgaat gtgcagtaag gagagattac tagaggagag agttgaagga
481 gctgagacac ttgcctatct gattgaacca gatgttgagc tacagagaat cgctagcata
541 actgatcacc tcattgccat gcttgctgat tatttcaagt atcccagctc agtgagtgcc
601 atcactgata ttaaaaggct tgatcatgat ttaaaacatg ctcacgaact ccgccaggct
661 gcattcaagc tctatgcctc tcttggagca aatgatgaag acatccggaa gaagatcatt
721 gagactgaaa atatgatgga ccgaattgtg actggcttgt ctgagtctag tgtcaaggtg
781 cggttagctg ccgtcagatg tttgcacagt ttatccagat ctgtgcagca gcttcgaacc
841 agtttccagg atcatgctgt ttggaaacct ttaatgaagg ttttacaaaa tgcaccagat
901 gaaatcctag tggtagcatc ttccatgctg tgtaatcttc ttcttgaatt ttctccaagc
961 aaagagccaa ttttggaatc aggagccgta gagctacttt gtggattaac tcagagtgaa
1021 aatcctgctt tacgagtgaa tggaatttgg gctttaatga atatggcatt tcaggctgaa
1081 caaaaaataa aagcagatat tttacgaagc ttgagtactg aacagctatt ccggttatta
1141 tcagattcag atttgaatgt gctgatgaag acattgggac ttcttagaaa tctcctctcc
1201 actcgtcctc atatagataa aataatgagt actcatggaa agcaaattat gcaagccgtc
1261 actcttattc tagaagggga acataacatt gaggtcaaag agcagacact gtgcatctta
1321 gccaacatag cggatgggac aacagcaaaa gatcttatta tgaccaatga tgatatccta
1381 cagaaaatca agtattacat gggccattca catgttaaac tgcagcttgc agccatgttt
1441 tgtatatcaa acctcatatg gaatgaagag gaaggttcac aagaacgcca ggataaatta
1501 cgagacatgg gcatcgtaga tattctacac aaactgagtc agtcaccaga ttcaaacctt
1561 tgtgacaagg caaagatggc actgcagcag tacctggcat gatgggagtg cccctgggca
1621 cctgcgagca tcccacctcc ttgtttaagg aagtacagga accagcctca tttgattcct
1681 tctatttgca caagtcacct tggactgcag g
//