LOCUS AK315854 1634 bp mRNA linear HUM 12-JAN-2008
DEFINITION Homo sapiens cDNA, FLJ79503 complete cds, highly similar to
Spindlin-1.
ACCESSION AK315854
VERSION AK315854.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1634)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1634
/clone="TRACH3015298"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000434720"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 664..1452
/codon_start=1
/note="highly similar to Spindlin-1"
/protein_id="BAF98745.1"
/transl_table=1
/translation="MKTPFGKTPGQRSRADAGHAGVSANMMKKRTSHKKHRSSVGPSK
PVSQPRRNIVGCRIQHGWKEGNGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLEL
NKDERVSALEVLPDRVATSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAP
VMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQV
EYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS"
BASE COUNT 429 a 359 c 411 g 435 t
ORIGIN
1 acccctccca ggcccggggg atggccgcgg accttgtaag ttgcaggctc cgcggttcgc
61 ggcgccggaa cgcccaccgg ccagtcctcg cgcccgcgca gcccctttcc tgatgcgccg
121 tctcttcgcc gccctccgtg ggggcgcggc gaacgggttg cgtgctctgg agagagacag
181 gcacttttcc tctccatcgt gagtgacctt gggtgtattc gtcaaggaat gtgttgaaac
241 gaattgtgcg atgcgggaac tgcgcagcgc ctcgggtttg gctttctcga gcattttatt
301 gcattgattg tgcgttctcg attttacaga ggaagtttat ctcgacaatg ctagttgcag
361 tctgtgtgac cctgaccaag ttattttaat gtctgtgctg cagtttttca gtttccaaga
421 tggaatagtt atagtgcata tcttcctcat ggttgtgagg agtgcatgac acatagcgag
481 tgctcagtga acagtcattt ttctgagtgc ttgtgatttc acgtattttt gctgaactcg
541 taaaagagac acttggatgg tggattaacc agaacactaa cattctgtga aaagtttcaa
601 attggagaat attgaatttt caccctagtc cagcagctcc gctgctcact taaatacaga
661 tgaatgaaga ccccattcgg aaagacacct ggccagcggt ccagagctga tgcaggccat
721 gctggagtat ctgccaacat gatgaagaag aggacatccc acaaaaaaca tcggagcagt
781 gtgggtccga gcaaacctgt ttcccagccc cggcggaaca tcgtaggctg caggattcag
841 catgggtgga aagaggggaa tggccctgtt acccagtgga aaggaaccgt tctggaccag
901 gtgcctgtaa atccttcttt gtatcttata aaatacgatg gatttgactg tgtttatgga
961 ctagaactta ataaagatga aagagtttct gcgcttgaag tcctccctga tagagttgcg
1021 acatctcgaa tcagcgatgc acacttggca gacacaatga ttggcaaagc agtggaacat
1081 atgtttgaga cagaggatgg ttctaaagat gagtggaggg gaatggtctt agcacgtgca
1141 cctgtcatga acacatggtt ttacattacc tatgagaaag accctgtctt gtacatgtac
1201 caactcttag atgattacaa agaaggcgac cttcgcatta tgcctgattc caatgattca
1261 cctccagcag aaagggaacc aggagaagtt gtggacagcc tggtaggcaa acaagtggaa
1321 tatgccaaag aagatggctc gaaaaggact ggcatggtca ttcatcaagt agaagccaag
1381 ccctccgtct atttcatcaa gtttgatgat gatttccata tttatgtcta cgatttggtg
1441 aaaacatcct agatgtcatc acaaactctg ccaaatttgt ggaactatga aatgtattat
1501 ttgtagacat aaagacttga ttgctttcca gtttaatgaa agcttaaatg tccctgcgaa
1561 cccacaatct ctgccagcag aactggtttt gttctgaata gtacagattg atgtgaacac
1621 aaagcatttt gtgt
//