LOCUS AK315846 1320 bp mRNA linear HUM 12-JAN-2008
DEFINITION Homo sapiens cDNA, FLJ79495 complete cds, highly similar to Homo
sapiens V-set and immunoglobulin domain containing 1 (VSIG1), mRNA.
ACCESSION AK315846
VERSION AK315846.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1320)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1320
/clone="TESTI4021662"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000434712"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 67..1230
/codon_start=1
/note="highly similar to Homo sapiens V-set and
immunoglobulin domain containing 1 (VSIG1), mRNA"
/protein_id="BAF98737.1"
/transl_table=1
/translation="MVFAFWKVFLILSCLAGQVSVVQVTIPDGFVNVTVGSNVTLICI
YTTTVASREQLSIQWSFFHKKEMEPISIYFSQGGQAVAIGQFKDRITGSNDPGNASIT
ISHMQPADSGIYICDVNNPPDFLGQNQGILNVSVLVKPSKPLCSVQGRPETGHTISLS
CLSALGTPSPVYYWHKLEGRDIVPVKENFNPTTGILVIGNLTNFEQGYYQCTAINRLG
NSSCEIDLTSSHPEVGIIVGALIGSLVGAAIIISVVCFARNKAKAKAKERNSKTIAEL
EPMTKINPRGESEAMPREDATQLEVTLPSSIHETGPDTIQEPDYEPKPTQEPAPEPAP
GSEPMAVPDLDIELELEPETQSELEPEPEPEPESEPGVVVEPLSEDEKGVVKA"
BASE COUNT 373 a 339 c 296 g 312 t
ORIGIN
1 aatttgagac tcagcctagt ccaggcaagc tactggcacc tgctgctctc aactaacctc
61 cacacaatgg tgttcgcatt ttggaaggtc tttctgatcc taagctgcct tgcaggtcag
121 gttagtgtgg tgcaagtgac catcccagac ggtttcgtga acgtgactgt tggatctaat
181 gtcactctca tctgcatcta caccaccact gtggcctccc gagaacagct ttccatccag
241 tggtctttct tccataagaa ggagatggag ccaatttcta tttacttttc tcaaggtgga
301 caagctgtag ccatcgggca atttaaagat cgaattacag ggtccaacga tccaggtaat
361 gcatctatca ctatctcgca tatgcagcca gcagacagtg gaatttacat ctgcgatgtt
421 aacaaccccc cagactttct cggccaaaac caaggcatcc tcaacgtcag tgtgttagtg
481 aaaccttcta agcccctttg tagcgttcaa ggaagaccag aaactggcca cactatttcc
541 ctttcctgtc tctctgcgct tggaacacct tcccctgtgt actactggca taaacttgag
601 ggaagagaca tcgtgccagt gaaagaaaac ttcaacccaa ccaccgggat tttggtcatt
661 ggaaatctga caaattttga acaaggttat taccagtgta ctgccatcaa cagacttggc
721 aatagttcct gcgaaatcga tctcacttct tcacatccag aagttggaat cattgttggg
781 gccttgattg gtagcctggt aggtgccgcc atcatcatct ctgttgtgtg cttcgcaagg
841 aataaggcaa aagcaaaggc aaaagaaaga aattctaaga ccatcgcgga acttgagcca
901 atgacaaaga taaacccaag gggagaaagc gaagcaatgc caagagaaga cgctacccaa
961 ctagaagtaa ctctaccatc ttccattcat gagactggcc ctgataccat ccaagaacca
1021 gactatgagc caaagcctac tcaggagcct gccccagagc ctgccccagg atcagagcct
1081 atggcagtgc ctgaccttga catcgagctg gagctggagc cagaaacgca gtcggaattg
1141 gagccagagc cagagccaga gccagagtca gagcctgggg ttgtagttga gcccttaagt
1201 gaagatgaaa agggagtggt taaggcatag gctggtggcc taagtacagc attaatcatt
1261 aaggaaccca ttactgccat ttggaattca aataacctaa ccaacctcca cctcctcctt
//