LOCUS AK315845 3960 bp mRNA linear HUM 12-JAN-2008
DEFINITION Homo sapiens cDNA, FLJ79494 complete cds, highly similar to
Structural maintenance of chromosome 3.
ACCESSION AK315845
VERSION AK315845.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3960)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3960
/clone="TESTI4021291"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000434711"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 126..3779
/codon_start=1
/note="highly similar to Structural maintenance of
chromosome 3"
/protein_id="BAF98736.1"
/transl_table=1
/translation="MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYA
IQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVI
GAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLR
EVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDK
MRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRE
LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLL
EKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERD
KWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEE
LDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNG
IDSINKVLDHFRRKGINQHVQNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSD
EVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFK
HVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDV
RKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQIETQQRKFKASRDSTLSEMK
MLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVD
ALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGG
TVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDA
INHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQC
NTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQ
LTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVP
SVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEID
QALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAE
MAKDFVEDDTTHG"
BASE COUNT 1426 a 630 c 941 g 963 t
ORIGIN
1 gttgtttggc tgaggggagc gagcggcgct ttgggggagg ggtcgcgtag gcgcctcacc
61 tgaccctgcg gccgtgcggt tgctgctccg gggcaggtct ccttccaggc caggggcccg
121 gaatcatgta cataaagcag gtgattatcc agggttttcg aagttacaga gatcaaacaa
181 ttgtagatcc cttcagttca aaacataatg tgattgtggg cagaaatgga tctggaaaaa
241 gtaacttttt ttatgcaatt cagtttgttc tcagtgatga gtttagtcat cttcgtccag
301 aacagcggtt ggctttattg catgaaggta ctggtcctcg tgttatttct gcttttgtgg
361 agattatttt tgataattca gacaaccggt taccaatcga taaagaggaa gtttcacttc
421 gaagagttat tggtgccaaa aaggatcagt atttcttaga caagaagatg gtcacgaaaa
481 atgatgtgat gaacctcctt gaaagcgctg gtttttctcg aagcaatcct tattatattg
541 ttaaacaagg aaagatcaac cagatggcaa cagcaccaga ttctcagaga ttaaagctat
601 taagagaagt agctggtact agagtgtatg acgaacgaaa ggaagaaagc atctccttaa
661 tgaaagaaac agagggcaaa cgggaaaaaa tcaatgagtt gttaaaatac attgaagaga
721 gattacatac tctagaggaa gaaaaggaag aactagctca gtatcagaag tgggataaaa
781 tgagacgagc cctggaatat accatttaca atcaggaact taacgagact cgtgccaaac
841 ttgatgagct ttctgctaag cgagagacta gtggagaaaa atccagacaa ttaagagatg
901 ctcagcagga tgcaagagat aaaatggagg atatcgaacg ccaagttaga gaattgaaaa
961 caaaaatttc agctatgaaa gaagaaaaag aacagcttag tgctgaaaga caagagcaga
1021 ttaagcagag gactaagttg gagcttaaag ccaaggattt acaagatgaa ctagcaggca
1081 atagtgaaca aaggaaacgt ttattaaaag agaggcagaa gctgcttgaa aaaatagaag
1141 aaaagcagaa agaactggca gaaacagaac ccaaattcaa cagtgtgaaa gagaaagaag
1201 aacgaggaat tgctagattg gctcaagcta cccaggaaag aacggatctt tatgcaaagc
1261 agggtcgagg aagccagttt acatcaaaag aagaaaggga taagtggatt aaaaaggaac
1321 tcaagtcttt agatcaggct attaatgaca agaaaagaca gattgctgct atacataagg
1381 atttggaaga cactgaagca aataaagaga aaaatctgga gcagtataat aaactggacc
1441 aggatcttaa tgaagtcaaa gctcgagtag aagaactgga cagaaaatat tacgaagtaa
1501 aaaataagaa agatgaacta caaagtgaaa gaaactactt gtggagagaa gagaatgcag
1561 aacagcaagc acttgctgct aaaagagaag atcttgaaaa gaagcaacaa cttcttagag
1621 cagcaacagg aaaggccatt ttaaatggaa tagacagcat aaacaaagtg ctagaccact
1681 tccgtcgaaa aggaataaac cagcatgttc aaaatggcta tcatggtatt gtaatgaata
1741 actttgaatg tgaaccagct ttctacacat gcgtggaagt cactgctgga aacaggttat
1801 tttatcacat tgttgattca gatgaagtca gcacgaagat tttaatggag tttaataaaa
1861 tgaatcttcc tggagaggtt acttttctgc ctcttaacaa gttagatgtc agggatacag
1921 cctatcctga aaccaatgat gctattccta tgatcagcaa actgaggtac aatcccagat
1981 ttgacaaagc tttcaaacat gtgtttggaa agactcttat ttgtcgtagc atggaagttt
2041 caacccagct ggcccgtgct ttcactatgg actgtattac tttggaaggt gaccaagtca
2101 gccatcgggg tgctctaact gggggttatt atgacacaag gaagtctcga cttgaattgc
2161 aaaaagatgt tagaaaagca gaagaagaac taggtgaact tgaagcaaag ctcaatgaaa
2221 acctgcgcag aaatattgaa aggattaata atgaaattga tcagttgatg aaccaaatgc
2281 aacagatcga gacccagcaa aggaaattta aagcatctag agatagcaca ttatcagaaa
2341 tgaagatgct aaaggagaag aggcagcagt cagagaaaac cttcatgcct aagcaacgta
2401 gcttacagag tttggaggca agcttgcatg ctatggagtc taccagagag tcattgaaag
2461 cagaactggg aactgatttg ctttctcaac tgagtttgga agatcagaag agagtagatg
2521 cactgaatga tgagattcgt caacttcagc aggaaaacag acagttgcta aatgaaagaa
2581 ttaaattaga aggtattatt actcgagtag agacttatct caatgagaat ctgagaaaac
2641 gcttggacca agtagaacag gaacttaatg agctgagaga gacagaaggg ggtactgttc
2701 tcacagccac aacatcagaa cttgaagcca tcaataaaag agtaaaagac actatggcac
2761 gatcagaaga tttggacaat tccattgata aaacagaagc tggaattaag gagcttcaga
2821 agagtatgga gcgctggaaa aatatggaaa aagaacatat ggatgctata aatcatgata
2881 ctaaagaact ggaaaagatg acaaatcggc aaggcatgct attgaagaag aaagaagagt
2941 gtatgaagaa aattcgagaa cttggatcac ttccccagga agcatttgaa aagtaccaga
3001 cactgagcct caaacagttg tttcgaaaac ttgagcagtg caacacagaa ttaaagaagt
3061 acagccatgt taacaaaaag gctttggatc agtttgtaaa tttctccgag cagaaagaaa
3121 agttaataaa gcgtcaagaa gagttagata ggggttacaa atcgatcatg gaactgatga
3181 atgtacttga acttcggaaa tatgaagcta ttcagttaac tttcaaacag gtatctaaga
3241 acttcagtga agtattccag aagttagtac ctggtggcaa agctactttg gtgatgaaga
3301 aaggagatgt ggagggcagt cagtctcaag atgaaggaga agggagtggt gagagtgaga
3361 ggggttctgg ctcacaaagc agtgtcccat cagttgacca gtttactgga gttggaatta
3421 gggtgtcatt tacaggaaaa caaggtgaaa tgagagaaat gcaacagctt tcaggtggac
3481 agaaatcctt ggtagccctt gctctgattt ttgccattca gaaatgtgac ccggctccat
3541 tttacttgtt tgatgaaatt gaccaggctc tggatgctca gcacagaaag gctgtgtcag
3601 atatgattat ggaacttgct gtacatgctc agtttattac aactactttt aggcctgaac
3661 tgcttgagtc agctgacaaa ttctatggtg taaagttcag aaataaggtt agtcatattg
3721 atgtgatcac agcagagatg gccaaagact ttgtagaaga tgataccaca catggttaat
3781 tggaaaatac tacctactgg tttgggagat gtatatagta atatgattct catacccagg
3841 aactgtaaat ttaaacctaa atatttggcc aatagttttc agacttaaag catcatagtc
3901 cttttatatt tgtctttgta ttttataaga tactctgtaa tgtcatgttt gtactgatag
//