LOCUS AK315842 2048 bp mRNA linear HUM 12-JAN-2008
DEFINITION Homo sapiens cDNA, FLJ79491 complete cds, highly similar to
SHC-transforming protein 1.
ACCESSION AK315842
VERSION AK315842.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2048
/clone="TBAES2005404"
/clone_lib="TBAES2"
/db_xref="H-InvDB:HIT000434708"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="breast, tumor tissue"
CDS 151..1575
/codon_start=1
/note="highly similar to SHC-transforming protein 1"
/protein_id="BAF98733.1"
/transl_table=1
/translation="MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDK
VMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPC
SRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDT
AEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDR
MAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMRLREGAAPGAARPTAPNAQT
PSHLGATLPVGQPVGGDPEVRKQMPPPPPCPAGRELFDDPSYVNVQNLDKARQAVGGA
GPPNPAINGSAPRDLFDMKPFEDALRVPPPPQSVSMAEQLRGEPWFHGKLSRREAEAL
LQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYH
MDNHLPIISAGSELCLQQPVERKL"
BASE COUNT 445 a 586 c 594 g 423 t
ORIGIN
1 gttagtgagg ccggaagtga gtgtaataaa gtttctccag ggaggcaggg cccggggaga
61 aagttggagc ggtaacctaa gctggcagtg gcgtgatccg gcaccaaatc ggcccgcggt
121 gcggtgcgga gactccatga ggccctggac atgaacaagc tgagtggagg cggcgggcgc
181 aggactcggg tggaaggggg ccagcttggg ggcgaggagt ggacccgcca cgggagcttt
241 gtcaataagc ccacgcgggg ctggctgcat cccaacgaca aagtcatggg acccggggtt
301 tcctacttgg ttcggtacat gggttgtgtg gaggtcctcc agtcaatgcg tgccctggac
361 ttcaacaccc ggactcaggt caccagggag gccatcagtc tggtgtgtga ggctgtgccg
421 ggtgctaagg gggcgacaag gaggagaaag ccctgtagcc gcccgctcag ctctatcctg
481 gggaggagta acctgaaatt tgctggaatg ccaatcactc tcaccgtctc caccagcagc
541 ctcaacctca tggccgcaga ctgcaaacag atcatcgcca accaccacat gcaatctatc
601 tcatttgcat ccggcgggga tccggacaca gccgagtatg tcgcctatgt tgccaaagac
661 cctgtgaatc agagagcctg ccacattctg gagtgtcccg aagggcttgc ccaggatgtc
721 atcagcacca ttggccaggc cttcgagttg cgcttcaaac aatacctcag gaacccaccc
781 aaactggtca cccctcatga caggatggct ggctttgatg gctcagcatg ggatgaggag
841 gaggaagagc cacctgacca tcagtactat aatgacttcc cggggaagga accccccttg
901 gggggggtgg tagacatgag gcttcgggaa ggagccgctc caggggctgc tcgacccact
961 gcacccaatg cccagacccc cagccacttg ggagctacat tgcctgtagg acagcctgtt
1021 gggggagatc cagaagtccg caaacagatg ccacctccac caccctgtcc agcaggcaga
1081 gagctttttg atgatccctc ctatgtcaac gtccagaacc tagacaaggc ccggcaagca
1141 gtgggtggtg ctgggccccc caatcctgct atcaatggca gtgcaccccg ggacctgttt
1201 gacatgaagc ccttcgaaga tgctcttcgc gtgcctccac ctccccagtc ggtgtccatg
1261 gctgagcagc tccgagggga gccctggttc catgggaagc tgagccggcg ggaggctgag
1321 gcactgctgc agctcaatgg ggacttcctg gtacgggaga gcacgaccac acctggccag
1381 tatgtgctca ctggcttgca gagtgggcag cctaagcatt tgctactggt ggaccctgag
1441 ggtgtggttc ggactaagga tcaccgcttt gaaagtgtca gtcaccttat cagctaccac
1501 atggacaatc acttgcccat catctctgcg ggcagcgaac tgtgtctaca gcaacctgtg
1561 gagcggaaac tgtgatctgc cctagcgctc tcttccagaa gatgccctcc aatcctttcc
1621 accctattcc ctaactctcg ggacctcgtt tgggagtgtt ctgtgggctt ggccttgtgt
1681 cagagctggg agtagcatgg actctgggtt tcatatccag ctgagtgaga gggtttgagt
1741 caaaagcctg ggtgagaatc ctgcctctcc ccaaacatta atcaccaaag tattaatgta
1801 cagagtggcc cctcacctgg gcctttcctg tgccaacctg atgccccttc cccaagaagg
1861 tgagtgcttg tcatggaaaa tgtcctgtgg tgacaggccc agtggaacag tcacccttct
1921 gggcaagggg gaacaaatca cacctctggg cttcagggta tcccagaccc ctctcaacac
1981 ccgccccccc catgtttaaa ctttgtgcct ttgaccatct cttaggtcta atgatatttt
2041 atgcaaac
//