LOCUS AK315824 1715 bp mRNA linear HUM 12-JAN-2008
DEFINITION Homo sapiens cDNA, FLJ79473 complete cds.
ACCESSION AK315824
VERSION AK315824.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1715)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1715
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2000648"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000434690"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 157..1632
/codon_start=1
/protein_id="BAF98715.1"
/transl_table=1
/translation="MIATGGVITGLAALKRQDSARSQQHVNLSPSPATQEKKPIRRRP
RADVVVVRGKIRLYSPSGFFLILGVLISIIGIAMAVLGYWPQKEHFIDAETTLSTNET
QVIRNEGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHENRDKETKIIHM
RDIYSTVIDIHTLRIKEQRQMNGMYTGLMGETEVKQNGSSCASRLAANTIASFSGFRS
SFRMDSSVEEDELMLNEGKSSGHLMPPLLSDSSVSVFGLYPPPSKTTDDKTSGSKKCE
TKSIVSSSISAFTLPVIKLNNCVIDEPSIDNITEDADNLKSRSRNLSMDSLVVPLPNT
SESFQPVSTVLPRNNSIGESLSSQYKSSMALGPGAGQLLSPGAARRQFGSNTSLHLLS
SHSKSLDLDRGPSTLTVQAEQRKHPSWPRLDRNNSKGYMKLENKEDPMDRLLVPQVAI
KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF"
BASE COUNT 469 a 398 c 399 g 449 t
ORIGIN
1 attcccgctg acgcccccga ccctgccgcc ttcttcgtcc gcctccagag gcgcccgacg
61 tcccgacagc tcctggagtg agaccaggac tgagaacagg gagaggcgac ccgaccccca
121 gggcccggtg ctcaggacag agtaaaaggc caagctatga tagcaactgg tggagtgata
181 actggcctgg ccgccctgaa aaggcaagac tctgccagat cacagcagca tgtcaacctc
241 agcccgtctc ctgctaccca agagaagaag cccatcaggc gccggccccg ggcagatgtt
301 gtggttgttc gtggcaaaat ccggctttat tccccatctg gtttttttct tattttagga
361 gtgctcatct ccattatagg aattgctatg gctgttcttg gatattggcc ccaaaaagaa
421 cattttattg atgctgaaac aacactgtca acaaatgaaa ctcaggtcat tcggaatgaa
481 ggcggtgtgg tggttcgctt ctttgagcag catttgcatt ctgataagat gaaaatgctt
541 ggcccattca ccatggggat tggcattttc attttcattt gtgctaatgc cattcttcat
601 gaaaaccgtg acaaagagac caaaatcata cacatgaggg atatctattc cacagtcatt
661 gacattcaca cgctaagaat caaggagcaa aggcaaatga acggcatgta cactggtttg
721 atgggagaaa cagaagtaaa acagaatggg agctcctgtg cctcgagatt ggcagcaaat
781 acgatcgcct ctttctcggg ttttcggagc agttttcgaa tggacagctc cgtggaggag
841 gatgaactta tgttaaatga aggtaagagt tctgggcatc ttatgccccc tttgctctct
901 gacagctctg tgtctgtctt tggcctctat ccacctcctt ccaagacaac tgatgataag
961 accagcggct ctaagaaatg tgaaaccaag tcaattgtgt catcgtccat cagtgctttt
1021 acattgcctg tgatcaaact taataactgt gttattgatg agcccagtat agataacatc
1081 actgaagatg ctgacaacct caaaagtagg tcaaggaatt tgtcaatgga ttcccttgtg
1141 gttcctttgc ccaacaccag tgaatccttc cagcccgtca gcacagtgct accaaggaat
1201 aattccattg gggagtcgtt gtcgagtcag tacaagtcat ctatggctct cggacctggg
1261 gctggacagc tcttgtctcc tggggctgcc agaagacagt ttgggtccaa tacatccttg
1321 catttgctct cgtcacactc aaagtccttg gacttagacc ggggtccctc cactctaact
1381 gttcaggcag aacaacggaa acatccaagt tggcctaggt tggatcggaa caacagcaag
1441 ggatatatga aactagagaa caaagaagac ccgatggata ggttgcttgt gccccaagtt
1501 gccatcaaaa aggactttac caataaggag aagcttctta tgatttcaag atctcacaat
1561 aatttgagtt ttgaacatga tgagtttttg agtaacaacc taaagagggg aacttctgaa
1621 acaaggtttt aatgttaaaa gaatatatca ttttacaagg gtatatattt taaaacgatt
1681 ttcactggtg tttccttctt aaagtattgg ctgta
//