LOCUS AK315799 714 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96920, Homo sapiens von Hippel-Lindau
syndrome (VHL), mRNA.
ACCESSION AK315799
VERSION AK315799.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 714)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..714
/cell_line="SK-N-SH"
/cell_type="neuroblastoma"
/clone="SKNSH2004882"
/clone_lib="SKNSH2"
/db_xref="H-InvDB:HIT000434665"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 73..714
/note="Homo sapiens von Hippel-Lindau syndrome (VHL),
mRNA"
/protein_id="BAG38142.1"
/translation="MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESG
PEELGAEEEMEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLP
PGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKE
RCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD"
BASE COUNT 148 a 212 c 240 g 114 t
ORIGIN
1 acgcagctcc gccccgcgtc cgacccgcgg atcccgcggc gtccggcccg ggtggtctgg
61 atcgcggagg gaatgccccg gagggcggag aactgggacg aggccgaggt aggcgcggag
121 gaggcaggcg tcgaagagta cggccctgaa gaagacggcg gggaggagtc gggcgccgag
181 gagtccggcc cggaagagtc cggcccggag gaactgggcg ccgaggagga gatggaggcc
241 gggcggccgc ggcccgtgct gcgctcggtg aactcgcgcg agccctccca ggtcatcttc
301 tgcaatcgca gtccgcgcgt cgtgctgccc gtatggctca acttcgacgg cgagccgcag
361 ccctacccaa cgctgccgcc tggcacgggc cgccgcatcc acagctaccg aggtcacctt
421 tggctcttca gagatgcagg gacacacgat gggcttctgg ttaaccaaac tgaattattt
481 gtgccatctc tcaatgttga cggacagcct atttttgcca atatcacact gccagtgtat
541 actctgaaag agcgatgcct ccaggttgtc cggagcctag tcaagcctga gaattacagg
601 agactggaca tcgtcaggtc gctctacgaa gatctggaag accacccaaa tgtgcagaaa
661 gacctggagc ggctgacaca ggagcgcatt gcacatcaac ggatgggaga ttga
//