LOCUS AK315650 1438 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96740, Homo sapiens apolipoprotein B mRNA
editing enzyme, catalyticpolypeptide-like 3G (APOBEC3G), mRNA.
ACCESSION AK315650
VERSION AK315650.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1438)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1438
/clone="SYNOV3000077"
/clone_lib="SYNOV3"
/db_xref="H-InvDB:HIT000434516"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 284..1438
/note="Homo sapiens apolipoprotein B mRNA editing enzyme,
catalyticpolypeptide-like 3G (APOBEC3G), mRNA"
/protein_id="BAG38016.1"
/translation="MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVKTKGP
SRPPLDAKIFRGQVYSELKYHPEMRFFHWFSKWRKLHRDQEYEVTWYISWSPCTKCTR
DMATFLAEDPKVTLTIFVARLYYFWDPDYQEALRSLCQKRDGPRATMKIMNYDEFQHC
WSKFVYSQRELFEPWNNLPKYYILLHIMLGEILRHSMDPPTFTFNFNNEPWVRGRHET
YLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQD
YRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIYDDQGRCQEGLRTLAEAGAK
ISIMTYSEFKHCWDTFVDHQGCPFQPWDGLDEHSQDLSGRLRAILQNQEN"
BASE COUNT 375 a 372 c 383 g 308 t
ORIGIN
1 aattgccttg ggtcctgccg cacagagcgg cctgtcttta tcagaggtcc ctctgccagg
61 gggagggccc cagagaaaac cagaaagagg gtgagagact gaggaagata aagcgtccca
121 gggcctccta caccagcgcc tgagcaggaa gcgggagggg ccatgactac gaggccctgg
181 gaggtcactt tagggagggc tgtcctaaaa ccagaagctt ggagcagaaa gtgaaaccct
241 ggtgctccag acaaagatct tagtcgggac tagccggcca aggatgaagc ctcacttcag
301 aaacacagtg gagcgaatgt atcgagacac attctcctac aacttttata atagacccat
361 cctttctcgt cggaataccg tctggctgtg ctacgaagtg aaaacaaagg gtccctcaag
421 gccccctttg gacgcaaaga tctttcgagg ccaggtgtat tccgaactta agtaccaccc
481 agagatgaga ttcttccact ggttcagcaa gtggaggaag ctgcatcgtg accaggagta
541 tgaggtcacc tggtacatat cctggagccc ctgcacaaag tgtacaaggg atatggccac
601 gttcctggcc gaggacccga aggttaccct gaccatcttt gttgcccgcc tctactactt
661 ctgggaccca gattaccagg aggcgcttcg cagcctgtgt cagaaaagag acggtccgcg
721 tgccaccatg aagatcatga attatgacga atttcagcac tgttggagca agttcgtgta
781 cagccaaaga gagctatttg agccttggaa taatctgcct aaatattata tattactgca
841 catcatgctg ggggagattc tcagacactc gatggatcca cccacattca ctttcaactt
901 taacaatgaa ccttgggtca gaggacggca tgagacttac ctgtgttatg aggtggagcg
961 catgcacaat gacacctggg tcctgctgaa ccagcgcagg ggctttctat gcaaccaggc
1021 tccacataaa cacggtttcc ttgaaggccg ccatgcagag ctgtgcttcc tggacgtgat
1081 tcccttttgg aagctggacc tggaccagga ctacagggtt acctgcttca cctcctggag
1141 cccctgcttc agctgtgccc aggaaatggc taaattcatt tcaaaaaaca aacacgtgag
1201 cctgtgcatc ttcactgccc gcatctatga tgatcaagga agatgtcagg aggggctgcg
1261 caccctggcc gaggctgggg ccaaaatttc aataatgaca tacagtgaat ttaagcactg
1321 ctgggacacc tttgtggacc accagggatg tcccttccag ccctgggatg gactagatga
1381 gcacagccaa gacctgagtg ggaggctgcg ggccattctc cagaatcagg aaaactga
//