LOCUS AK315630 1939 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96715.
ACCESSION AK315630
VERSION AK315630.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1939)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1939
/clone="SYNOV2000204"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000434496"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 272..1939
/protein_id="BAG37998.1"
/translation="MATDMQRKRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPGA
GQEGAMFVHARSYEDLTESEDGAASGDSHKEGTRGPPPLPTDMRQISQDFSELSTQLT
GVARDLQEEMLPGSSEDWLEPPGAVGRPATEPPREGTTEGDEEDATEAWRLHQKHVFV
LSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLV
LVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSGSERITD
NLLQLMARDPSFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSILLARNQLVALVR
RKDQFLHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLEPDTDLC
LLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALRTPYYSVAQVGIPDLRHFLY
KSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYYTGPNENLLA
WVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY"
BASE COUNT 374 a 618 c 597 g 350 t
ORIGIN
1 gagtcgggct gagcggctgg agctgggcct tggccgcgag aggccggcga aagctatctt
61 cctgcaccgg cggccgggtg agggcggtgg gagggagcgg tgcctgcgct gtggccatgt
121 ctgtgtacgc agggggccgg ggccccgcga agctgtgccc tcaggccggc cccggccgga
181 cacccttacc cctccatggg tccggcagag ggcagtgacc ggcaccttct gtgcgtcctg
241 gactcctctg agaaacagga gagctcaaag gatggctact gacatgcaga ggaagagaag
301 cagcgaatgc cttgatggca cattgactcc ttctgatgga cagagtatgg agagagctga
361 gagccccaca ccaggaatgg cccagggaat ggagccaggt gcgggccagg agggtgccat
421 gttcgtccat gcccgttcct acgaggacct gactgagtca gaggatgggg cagcttctgg
481 ggacagccac aaggagggta ccaggggtcc cccgccgctg cctacagaca tgcgccagat
541 cagccaggac tttagcgagc taagcaccca gctgacgggt gtggcccggg acctgcagga
601 ggagatgctg ccaggaagct ctgaggattg gctggaaccc ccaggggcag ttgggcgacc
661 agccacagag ccccccaggg agggcacaac cgagggggat gaggaggatg ccacggaggc
721 atggcgcctg caccagaagc atgtctttgt gctgagtgag gcagggaagc ctgtgtactc
781 ccgctatggg tctgaggagg cactttccag cactatgggt gttatggtgg ccctggtgtc
841 cttcctggag gcagacaaga acgccatccg ctccatccat gcagatggct acaaggtagt
901 attcgtgcgc cggagcccgc tggtgctagt ggcggtggct cgtacgcggc agtcggcaca
961 agagctggcg caggagctgc tctacatcta ctaccagatc ctaagccttc ttaccggtgc
1021 gcagctgagc cacatcttcc agcagaagca gaactatgat ttgcggcgcc tactctcggg
1081 ctcagagcgc atcaccgaca acctgctgca gctcatggca cgagacccca gcttcctgat
1141 gggggcggca cggtgcctgc ccctggcggc ggccgtgcgc gacactgtga gcgccagcct
1201 gcagcaggcg cgtgcgcgca gcctggtctt ctccatcctg ctggcccgca accagctcgt
1261 ggcactcgtg cgccgaaagg accaatttct gcaccccatc gacctgcacc tgctcttcaa
1321 cctcattagt tcctcctcgt cctttcgcga gggcgaggcc tggacgcccg tgtgcctgcc
1381 caaattcaac gcagccggct tcttccacgc acacatctct tacctagagc ctgacactga
1441 cctctgcctg ctgcttgtct ccactgaccg tgaggacttc tttgcagtct ctgactgccg
1501 ccgccgcttc caggagcgcc ttcgcaagcg cggagcccac ctggccctgc gagaggcact
1561 gcgcacaccc tactacagcg ttgcccaagt gggcatccct gacctgcgtc acttcctcta
1621 taagtcaaag agctcgggac tcttcaccag ccctgagatt gaggccccat acaccagtga
1681 agaggagcag gagcggctgc tgggcctcta ccagtacttg cacagtcgtg cccacaatgc
1741 ctctcgccca ctcaagacca tttactacac gggccccaac gagaacctcc tggcctgggt
1801 gacaggcgcc tttgagctct acatgtgtta cagccccctg gggaccaagg cgtcagccgt
1861 cagtgccatc cataagctga tgcgctggat ccgcaaagag gaagaccgcc tcttcattct
1921 cacgcccctc acctattga
//