LOCUS AK315580 1126 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96656, highly similar to Homo sapiens SPFH
domain family, member 1 (SPFH1), mRNA.
ACCESSION AK315580
VERSION AK315580.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1126)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1126
/clone="PLACE7009956"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000434446"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 86..1126
/note="highly similar to Homo sapiens SPFH domain family,
member 1 (SPFH1), mRNA"
/protein_id="BAG37953.1"
/translation="MTQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYRGGALLTSP
SGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFD
IVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMA
PGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEA
EKIAQVAKIRFQQKVMEKETEKRISEIEDAAFLAREKAKADAEYYAAHKYATSNKHKL
TPEYLELKKYQAVASNSKIYFGSNIPNMFVDSSCALKYSDIRTGRESSLPSKEALEPS
GENVIQNKESTG"
BASE COUNT 350 a 234 c 284 g 258 t
ORIGIN
1 gttggcggcg gttggctcgg cgcgggagtc ggctgcacgt gcgggcgggg gcgatgcgtc
61 actgatcgga ggaacgagaa tgaatatgac tcaagcccgg gttctggtgg ctgcagtggt
121 ggggttggtg gctgtcctgc tctacgcctc catccacaag attgaggagg gccatctggc
181 tgtgtactac aggggaggag ctttactaac tagccccagt ggaccaggct atcatatcat
241 gttgcctttc attactacgt tcagatctgt gcagacaaca ctacaaactg atgaagttaa
301 aaatgtgcct tgtggaacaa gtggtggggt catgatctat attgaccgaa tagaagtggt
361 taatatgttg gctccttatg cagtgtttga tatcgtgagg aactatactg cagattatga
421 caagacctta atcttcaata aaatccacca tgagctgaac cagttctgca gtgcccacac
481 acttcaggaa gtttacattg aattgtttga tcaaatagat gaaaacctga agcaagctct
541 gcagaaagac ttaaacctca tggccccagg tctcactata caggctgtgc gtgttacaaa
601 acccaaaatc ccagaagcca taagaagaaa ttttgagtta atggaggctg agaagacaaa
661 actccttata gctgcacaga aacaaaaggt tgtggaaaaa gaagctgaga cagagaggaa
721 aaaggcagtt atagaagcag agaagattgc acaagtggca aaaattcggt ttcagcagaa
781 agtgatggaa aaagaaactg aaaagcgcat ttctgaaatc gaagatgctg cattcctggc
841 ccgagagaaa gcgaaagcag atgctgaata ttatgctgca cacaaatatg ccacctcaaa
901 caagcacaag ttgaccccgg aatatctgga gctcaaaaag taccaggccg ttgcttctaa
961 cagtaagatc tattttggca gcaacatccc taacatgttc gtggactcct catgtgcttt
1021 gaaatattca gatattagga ctggaagaga aagctcactc ccctctaagg aggctcttga
1081 accctctgga gagaacgtca tccaaaacaa agagagcaca ggttga
//