LOCUS AK315551 2307 bp mRNA linear HTC 12-JAN-2008
DEFINITION Homo sapiens cDNA, FLJ96621.
ACCESSION AK315551
VERSION AK315551.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2307)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
The reason of remaining 5'-end "N": This sequence was generated
from 5'-end region of cDNA insert including about 20 base of the
sequence before "N". This cDNA was obtained from oligo-capped cDNA
library by which method 5'-end of mRNA was efficiently cloned.
Therefore remaining 5'-end "N" is important for a detection of
transcription start site of this mRNA.
FEATURES Location/Qualifiers
source 1..2307
/clone="PLACE7001919"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000434417"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
BASE COUNT 541 a 613 c 802 g 350 t
ORIGIN
1 ntttttcttc tcgggctgca aacaaaggga agcctgcaac aagttaagct gaagaccgaa
61 gcaagagctg gttcaggtgg cagccacagc agcctcaggg acctcagcaa ctatggcctc
121 ctgcccagac tctgataata gctgggtgct tgctggctcc gagagcctgc cagtggagac
181 actgggcccg gcatccagga tggacccaga atctgagaga gccctgcagg cccctcacag
241 cccctccaag acagatggga aagaattagc tgggaccatg gatggagaag ggacgctctt
301 ccagactgaa agccctcagt ctggcagcat tctaacagag gagactgagg tcaagggcac
361 cctggaaggt gatgtttgtg gtgtggagcc tcctggccca ggagacacag tagtccaggg
421 agacctgcag gagaccaccg tggtgacagg cctgggacca gacacacagg acctggaagg
481 ccagagccct ccacagagcc tgccttcaac ccccaaagca gcttggatca gggaggaggg
541 ccgctgctcc agcagtgacg atgacaccga cgtggacatg gagggtctgc ggagacggcg
601 gggccgggag gccggcccac ctcagcccat ggtgcccctg gctgtggaga accaggctgg
661 gggtgagggt gcaggcgggg agctgggcat ctccctcaac atgtgcctcc ttggggccct
721 ggttctgctt ggcctggggg tcctcctctt ctcaggtggc ctctcagagt ctgagactgg
781 gcccatggag gaagtggagc ggcaggtcct cccagacccc gaggtgctgg aagctgtggg
841 ggacaggcag gatgggctaa gggaacagct gcaggcccca gtgcctcctg acagtgtccc
901 cagcctgcaa aacatgggtc ttctgctgga caagctggcc aaggagaacc aggacatccg
961 gctgctgcag gcccagctgc aggcccaaaa ggaagagctt cagagcctga tgcaccagcc
1021 caaagggcta gaggaggaga atgcccagct ccggggggct ctgcagcagg gcgaagcctt
1081 ccagcgggct ctggagtcag agctgcagca gctgcgggcc cggctccagg ggctggaggc
1141 cgactgtgtc cggggcccag atggggtgtg cctcagtggg gatagaggcc cacagggtga
1201 caaggccatc agggagcaag gccccaggga gcaggagcca gaactcagct tcctgaagca
1261 gaaggaacag ctggaggctg aggcacaggc attaaggcaa gagttagaga ggcagcgacg
1321 gctgctgggg tctgtacagc aggatctgga gaggagcttg caggatgcca gccgcgggga
1381 cccagctcat gctggcttgg ctgagctggg ccacagattg gcccagaaac tgcagggcct
1441 ggagaactgg ggccaggacc ctggggtctc tgccaatgcc tcaaaggcct ggcaccagaa
1501 gtcccacttc cagaattcta gggagtggag tggaaagaaa agtggtggga tgggcagaga
1561 gaccggaagg ctgagcactg gaaacataag aaggaagaat ctggccggga aaggaagaag
1621 aactggggag gtcaggagga cagggagcca gcaggaaggt ggaaggaggg caggccaagg
1681 gtggaggagt cggggagcaa gaaggagggc aagcgacagg gcccgaagga acccccaagg
1741 aaaagtggta gcttccactc ctctggagaa aagcagaagc aacctcggtg gagggaaggg
1801 actaaggaca gccatgaccc cctgccatcc tgggcagagc tgttgaggcc caagtaccgg
1861 gcaccccagg gctgctcagg tgtggacgag tgtgcccggc aggagggcct gactttcttt
1921 ggcacagagc tagccccagt gcggcaacag gagctggcct ctctgctaag aacatacttg
1981 gcacggctgc cctgggctgg gcagctgacc aaggagctac ccctctcacc tgctttcttt
2041 ggtgaggatg gcatcttccg tcatgaccgc ctccgcttcc gggattttgt ggatgccctg
2101 gaggacagct tggaggaggt ggctgtgcaa cagacaggtg atgatgatga agtagatgac
2161 tttgaggact tcatcttcag ccacttcttt ggagacaaag cactgaagaa gaggtcaggg
2221 aagaaggaca agcactcaca gagcccaaga gctgcggggc ccagggaggg gcacagccat
2281 agccaccacc accaccaccg gggctga
//