LOCUS AK315549 1851 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96618, highly similar to Homo sapiens
tyrosyl-DNA phosphodiesterase 1 (TDP1), mRNA.
ACCESSION AK315549
VERSION AK315549.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1851)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1851
/clone="PLACE7001521"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000434415"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 25..1851
/note="highly similar to Homo sapiens tyrosyl-DNA
phosphodiesterase 1 (TDP1), mRNA"
/protein_id="BAG37927.1"
/translation="MSQEGDYGRWTISSSDESEEEKPKPDKPSTSSLLCARQGAANEP
RYTCSEAQKAAHKRKISPVKFSNTDSVLPPKRQKSGSQEDLGWCLSSSDDELQPEMPQ
KQAEKVVIKKEKDISAPNDGTAQRTENHGAPACHRLKEEEDEYETSGEGQDIWDMLDK
GNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPE
FRKKPILLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLR
VVIHTSNLIHADWHQKTQGIWLSPLYPRIADGTHKSGESPTHFKADLISYLMAYNAPS
LKEWIDVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHASSMPNAESW
PVVGQFSSVGSLGADESKWLCSEFKENMLTLGKESKTPGKSSVPLYLIYPSVENVRTS
LEGYPAGGSLPYSIQTAEKQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIA
WFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSAFGLDSFKVKQKFFAGSQEP
MATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMWVPS"
BASE COUNT 519 a 448 c 442 g 442 t
ORIGIN
1 ggttctgtgc gcctcaggag tataatgtct caggaaggcg attatgggag gtggaccata
61 tctagtagtg atgaaagtga ggaagaaaag ccaaaaccag acaagccatc tacctcttct
121 cttctctgtg ccaggcaagg agcagcaaat gagcccaggt acacctgttc cgaggcccag
181 aaagctgcac acaagaggaa aatatcacct gtgaaattca gcaatacaga ttcagtttta
241 cctcccaaaa ggcagaaaag cggttcccag gaggacctcg gctggtgtct gtccagcagt
301 gatgatgagc tgcaaccaga aatgccgcag aagcaggctg agaaagtggt gatcaaaaag
361 gagaaagaca tctctgctcc caatgacggc actgcccaaa gaactgaaaa tcatggcgct
421 cccgcctgcc acaggctcaa agaggaggaa gacgagtatg agacatcagg ggagggccag
481 gacatttggg acatgctgga taaagggaac cccttccagt tttacctcac tagagtctct
541 ggagttaagc caaagtataa ctctggagcc ctccacatca aggatatttt atctccttta
601 tttgggacgc ttgtttcttc agctcagttt aactactgct ttgacgtgga ctggctcgta
661 aaacagtatc caccagagtt caggaagaag ccaatcctgc ttgtgcatgg tgataagcga
721 gaggctaagg ctcacctcca tgcccaggcc aagccttacg agaacatctc tctctgccag
781 gcaaagttgg atattgcgtt tggaacacac cacacgaaaa tgatgctgct gctctatgaa
841 gaaggcctcc gggttgtcat acacacctcc aacctcatcc atgctgactg gcaccagaaa
901 actcaaggaa tatggttgag ccccttatac ccacgaattg ctgatggaac ccacaaatct
961 ggagagtcgc caacacattt taaagctgat ctcatcagtt acttgatggc ttataatgcc
1021 ccttctctca aggagtggat agatgtcatt cacaagcacg atctctctga aacaaatgtt
1081 tatcttattg gttcaacccc aggacgcttt caaggaagtc aaaaagataa ttggggacat
1141 tttagactta agaagcttct gaaagaccat gcctcatcca tgcctaacgc agagtcctgg
1201 cctgtcgtag gtcagttttc aagcgttggc tccttgggag ccgatgaatc aaagtggtta
1261 tgttctgagt ttaaagagaa catgctgaca ctggggaagg aaagcaagac tccaggaaaa
1321 agctctgttc ctctttactt gatctatcct tctgtggaaa atgtgcggac cagtttagaa
1381 ggatatcctg ctgggggctc tcttccctat agcatccaga cagctgaaaa acagaattgg
1441 ctgcattcct attttcacaa atggtcagct gagacttctg gccgcagcaa tgccatgcca
1501 catattaaga catatatgag gccttctcca gacttcagta aaattgcttg gttccttgtc
1561 acaagcgcaa atctgtccaa ggctgcctgg ggagcattgg agaagaatgg cacccagctg
1621 atgatccgct cctacgagct cggggtcctt ttcctccctt cagcatttgg tctagacagt
1681 ttcaaagtga aacagaagtt cttcgctggc agccaggagc caatggccac ctttcctgtg
1741 ccatatgatt tgcctccaga actgtatgga agtaaagatc ggccatggat atggaacatt
1801 ccttatgtca aagcaccgga tacgcatggg aacatgtggg tgccctcctg a
//