LOCUS AK315332 2011 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96373, highly similar to Homo sapiens X-ray
repair complementing defective repair in Chinese hamster cells 1
(XRCC1), mRNA.
ACCESSION AK315332
VERSION AK315332.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2011)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2011
/clone="PLACE6000933"
/clone_lib="PLACE6"
/db_xref="H-InvDB:HIT000434198"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 110..2011
/note="highly similar to Homo sapiens X-ray repair
complementing defective repair in Chinese hamster cells 1
(XRCC1), mRNA"
/protein_id="BAG37732.1"
/translation="MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTIS
VVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSG
SNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEA
PSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQA
SSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLP
APTHTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPF
RSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGSRIVRKEWVLDCHRM
RRRLPSRRYLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQK
PPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQE
ENGEDPYAGSTDENTDSEEHQEPPDLPVPELPDFFQGKHFFLYGEFPGDERRKLIRYV
TAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQKLLPH
QLYGVVPQA"
BASE COUNT 472 a 616 c 581 g 342 t
ORIGIN
1 gcgcacttta gccagcgcag ggcgcacccc gctccctccc actctccctg cccctcggac
61 cccatactct acctcatcct tctggccagg cgaagcccac gacgttgaca tgccggagat
121 ccgcctccgc catgtcgtgt cctgcagcag ccaggactcg actcactgtg cagaaaatct
181 tctcaaggca gacacttacc gaaaatggcg ggcagccaag gcaggcgaga agaccatctc
241 tgtggtccta cagttggaga aggaggagca gatacacagt gtggacattg ggaatgatgg
301 ctcagctttc gtggaggtgc tggtgggcag ttcagctgga ggcgctgggg agcaagacta
361 tgaggtcctt ctggtcacct catctttcat gtccccttcc gagagccgca gtggctcaaa
421 ccccaaccgc gttcgcatgt ttgggcctga caagctggtc cgggcagccg ccgagaagcg
481 ctgggaccgg gtcaaaattg tttgcagcca gccctacagc aaggactccc cctttggctt
541 gagttttgta cggtttcata gccccccaga caaagatgag gcagaggccc cgtcccagaa
601 ggtgacagtg accaagcttg gccagttccg tgtgaaggag gaggatgaga gcgccaactc
661 tctgaggccg ggggctctct tcttcagccg gatcaacaag acatccccag tcacagccag
721 cgacccagca ggacctagct atgcagctgc taccctccag gcttctagtg ctgcctcctc
781 agcctctcca gtctccaggg ccataggcag cacctccaag ccccaggagt ctcccaaagg
841 gaagaggaag ttggatttga accaagaaga aaagaagacc cccagcaaac caccagccca
901 gctgtcgcca tctgttccca agagacctaa attgccagct ccaactcata ccccagccac
961 agccccagtc cctgcccgag cacagggggc agtgacaggc aaaccccgag gagaaggcac
1021 cgagcccaga cgaccccgag ctggcccaga ggagctgggg aagatccttc agggtgtggt
1081 agtggtgctg agtggcttcc agaacccctt ccgctccgag ctgcgagata aggccctaga
1141 gcttggggcc aagtatcggc cagactggac ccgggacagc acgcacctca tctgtgcctt
1201 tgccaacacc cccaagtaca gccaggtcct aggcctggga agccgcatcg tgcgtaagga
1261 gtgggtgctg gactgtcacc gcatgcgtcg gcggctgccc tcccggaggt acctcatggc
1321 agggccaggt tccagcagtg aggaggatga ggcctctcac agcggtggca gcggagatga
1381 agcccccaag cttcctcaga agcaacccca gaccaaaacc aagcccactc aggcagctgg
1441 acccagctca ccccagaagc ccccaacccc tgaagagacc aaagcagcct caccagtgct
1501 ccaggaagat atagacattg agggggtaca gtcagaagga caggacaatg gggcggaaga
1561 ttctggggac acagaggatg agctgaggag ggtggcagag cagaaggaac acagactgcc
1621 ccctggccag gaggagaatg gggaagaccc gtatgcaggc tccacggatg agaacacgga
1681 cagtgaggaa caccaggagc ctcctgatct gccagtccct gagctcccag atttcttcca
1741 gggcaagcac ttctttcttt acggggagtt ccctggggac gagcggcgga aactcatccg
1801 atacgtcaca gccttcaatg gggagctcga ggactatatg agtgaccggg ttcagtttgt
1861 gatcacagca caggaatggg atcccagctt tgaggaggcc ctgatggaca acccctccct
1921 ggcattcgtt cgtccccgat ggatctacag ttgcaatgag aagcagaagt tacttcctca
1981 ccagctctat ggggtggtgc cgcaagcctg a
//