LOCUS AK315307 2425 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96336, highly similar to Homo sapiens zinc
finger and BTB domain containing 20 (ZBTB20),mRNA.
ACCESSION AK315307
VERSION AK315307.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2425)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2425
/clone="SMINT2001123"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000434173"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 419..2425
/note="highly similar to Homo sapiens zinc finger and BTB
domain containing 20 (ZBTB20),mRNA"
/protein_id="BAG37711.1"
/translation="MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRA
HRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILT
AASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQ
SHPQHSVDRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITCI
HERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILE
RNESEECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDSQAEPT
QPEQAAEAPAEGGPQTNQLETGASSPERSNEVEMDSTVITVSNSSDKSVLQQPSVNTS
IGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKP
FLFSLPQPLAGQQTQFVTVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECT
LCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSIC
NKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPP
GARAGPPGVVACTEGTTYVCSVCPAKFDQIEQFNDHMRMHVSDG"
BASE COUNT 590 a 792 c 629 g 414 t
ORIGIN
1 acttgttgct tacggtacag tccagcatga gctggaaatg taggaacctc agcctcccaa
61 gcagaaagaa tctttgacca tcagtctgtg acctgcccct tctctttaca tgcagccgct
121 ctctgctccc tgccccaatg aacatctgca ctaggcccaa gccttggagt aatttacctg
181 aagagtgaca ccattgattt tgaaactact gaagaaaccc aagacagctg aaaaccagaa
241 ggcatctgag gagaatgaga ttactcagcc gggtggatcc agcgccaagc cgggccttcc
301 ctgcctgaac tttgaagctg ttttgtctcc agacccagcc ctcatccact caacacattc
361 actgacaaac tctcacgctc acaccgggtc atctgattgt gacatcagtt gcaaggggat
421 gaccgagcgc attcacagca tcaaccttca caacttcagc aattccgtgc tcgagaccct
481 caacgagcag cgcaaccgtg gccacttctg tgacgtaacg gtgcgcatcc acgggagcat
541 gctgcgcgca caccgctgcg tgctggcagc cggcagcccc ttcttccagg acaaactgct
601 gcttggctac agcgacatcg agatcccgtc ggtggtgtca gtgcagtcag tgcaaaagct
661 cattgacttc atgtacagcg gcgtgctacg ggtctcgcag tcggaagctc tgcagatcct
721 cacggccgcc agcatcctgc agatcaaaac agtcatcgac gagtgcacgc gcatcgtgtc
781 acagaacgtg ggcgatgtgt tcccggggat ccaggactcg ggccaggaca cgccgcgggg
841 cactcccgag tcaggcacgt caggccagag cagcgacacg gagtcgggct acctgcagag
901 ccacccacag cacagcgtgg acaggatcta ctcggcactc tacgcgtgct ccatgcagaa
961 tggcagcggc gagcgctctt tttacagcgg cgcagtggtc agccaccacg agactgcgct
1021 cggcctgccc cgcgaccacc acatggaaga ccccagctgg atcacatgca tccatgagcg
1081 ctcgcagcag atggagcgct acctgtccac cacccccgag accacgcact gccgcaagca
1141 gccccggcct gtgcgcatcc agaccctagt gggcaacatc cacatcaagc aggagatgga
1201 ggacgattac gactactacg ggcagcaaag ggtgcagatc ctggaacgca acgaatccga
1261 ggagtgcacg gaagacacag accaggccga gggcaccgag agtgagccca aaggtgaaag
1321 cttcgactcg ggcgtcagct cctccatagg caccgagcct gactcggtgg agcagcagtt
1381 tgggcctggg gcggcgcggg acagccaggc tgaacccacc caacccgagc aggctgcaga
1441 agcccccgct gagggtggtc cgcagacaaa ccagctagaa acaggtgctt cctctccgga
1501 gagaagcaat gaagtggaga tggacagcac tgttatcact gtcagcaaca gctccgacaa
1561 gagcgtccta caacagcctt cggtcaacac gtccatcggg cagccattgc caagtaccca
1621 gctctactta cgccagacag aaaccctcac cagcaacctg aggatgcctc tgaccttgac
1681 cagcaacacg caggtcattg gcacagctgg caacacctac ctgccagccc tcttcactac
1741 ccagcccgcg ggcagtggcc ccaagccttt cctcttcagc ctgccacagc ccctggcagg
1801 ccagcagacc cagtttgtga cagtgtccca gcccggtctg tcgaccttta ctgcacagct
1861 gccagcgcca cagcccctgg cctcatccgc aggccacagc acagccagtg ggcaaggcga
1921 aaaaaagcct tatgagtgca ctctctgcaa caagactttc accgccaaac agaactacgt
1981 caagcacatg ttcgtacaca caggtgagaa gccccaccaa tgcagcatct gttggcgctc
2041 cttctcctta aaggattacc ttatcaagca catggtgaca cacacaggag tgagggcata
2101 ccagtgtagt atctgcaaca agcgcttcac ccagaagagc tccctcaacg tgcacatgcg
2161 cctccaccgg ggagagaagt cctacgagtg ctacatctgc aaaaagaagt tctctcacaa
2221 gaccctcctg gagcgacacg tggccctgca cagtgccagc aatgggaccc cccctgcagg
2281 cacaccccca ggtgcccgcg ctggcccccc aggcgtggtg gcctgcacgg aggggaccac
2341 ttacgtctgc tccgtctgcc cagcaaagtt tgaccaaatc gagcagttca acgaccacat
2401 gaggatgcat gtgtctgacg gataa
//