LOCUS AK315280 2033 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96292, highly similar to Homo sapiens solute
carrier family 5 (choline transporter), member 7 (SLC5A7), mRNA.
ACCESSION AK315280
VERSION AK315280.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2033)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2033
/cell_line="SK-N-SH"
/cell_type="neuroblastoma"
/clone="SKNSH2005506"
/clone_lib="SKNSH2"
/db_xref="H-InvDB:HIT000434146"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 291..2033
/note="highly similar to Homo sapiens solute carrier
family 5 (choline transporter), member 7 (SLC5A7), mRNA"
/protein_id="BAG37689.1"
/translation="MAFHVEGLIAIIVFYLLILLVGIWAAWRTKNSGSAEERSEAIIV
GGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYGLAWAQAPIGYSLSLILGGLFF
AKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVD
MHISVIISALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWISVPFALSHPAVADIGFT
AVHAKYQKPWLGTVDSSEVYSWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFL
AAFGCLVMAIPAILIGAIGASTDWNQTAYGLPDPKTTEEADMILPIVLQYLCPVYISF
FGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASA
TAMALLTKTVYGLWYLSSDLVYIVIFPQLLCVLFVKGTNTYGAVAGYVSGLFLRITGG
GPYLYLQPLIFYPGYYPDDNGIYNQKFPFKTLAMVTSFLTNICISYLAKYLFESGTLP
PKLDVFDAVVARHSEENMDKTILVKNENIKLDELALVKPRQSMTLSSTFTNKEAFLDV
DSSPEGSGTEDNLQ"
BASE COUNT 460 a 518 c 480 g 574 t
ORIGIN
1 cgattcccac ctcgccctgc gccgcgcgcc ctccgccggc gccaacacct gtcaactctg
61 cgcgctccca ggttcttgga gacgccgagt gaggagccgc cctgaccgcc cggccccgct
121 ccgcactgca ccccgaccca ccccgcaccc tccctttctg caccctcgca cccacacccc
181 tcgcggttcc agggggcngg cggccccggg cggagcgctt tcgcgtgcag ccaccactcc
241 agacttaatg aagtagccag ctgcagaaga atctggatca ttagataaaa atggctttcc
301 atgtggaagg actgatagct atcatcgtgt tctaccttct aattttgctg gttggaatat
361 gggctgcctg gagaaccaaa aacagtggca gcgcagaaga gcgcagcgaa gccatcatag
421 ttggtggccg agatattggt ttattggttg gtggatttac catgacagct acctgggtcg
481 gaggagggta tatcaatggc acagctgaag cagtttatgt accaggttat ggcctagctt
541 gggctcaggc accaattgga tattctctta gtctgatttt aggtggcctg ttctttgcaa
601 aacctatgcg ttcaaagggg tatgtgacca tgttagaccc gtttcagcaa atctatggaa
661 aacgcatggg cggactcctg tttattcctg cactgatggg agaaatgttc tgggctgcag
721 caattttctc tgctttggga gccaccatca gcgtgatcat cgatgtggat atgcacattt
781 ctgtcatcat ctctgcactc attgccactc tgtacacact ggtgggaggg ctctattctg
841 tggcctacac tgatgtcgtt cagctctttt gcatttttgt agggctgtgg atcagcgtcc
901 cctttgcatt gtcacatcct gcagtcgcag acatcgggtt cactgctgtg catgccaaat
961 accaaaagcc gtggctggga actgttgact catctgaagt ctactcttgg cttgatagtt
1021 ttctgttgtt gatgctgggt ggaatcccat ggcaagcata ctttcagagg gttctctctt
1081 cttcctcagc cacctatgct caagtgctgt ccttcctggc agctttcggg tgcctggtga
1141 tggccatccc agccatactc attggggcca ttggagcatc aacagactgg aaccagactg
1201 catatgggct tccagatccc aagactacag aagaggcaga catgatttta ccaattgttc
1261 tgcagtatct ctgccctgtg tatatttctt tctttggtct tggtgcagtt tctgctgctg
1321 ttatgtcatc agcagattct tccatcttgt cagcaagttc catgtttgca cggaacatct
1381 accagctttc cttcagacaa aatgcttcgg acaaagaaat cgtttgggtt atgcgaatca
1441 cagtgtttgt gtttggagca tctgcaacag ccatggcctt gctgacgaaa actgtgtatg
1501 ggctctggta cctcagttct gaccttgttt acatcgttat cttcccccag ctgctttgtg
1561 tactctttgt taagggaacc aacacctatg gggccgtggc aggttatgtt tctggcctct
1621 tcctgagaat aactggaggg gggccatatc tgtatcttca gcccttgatc ttctaccctg
1681 gctattaccc tgatgataat ggtatatata atcagaaatt cccatttaaa acacttgcca
1741 tggttacatc attcttaacc aacatttgca tctcctatct agccaagtat ctatttgaaa
1801 gtggaacctt gccacctaaa ttagatgtat ttgatgctgt tgttgcaaga cacagtgaag
1861 aaaacatgga taagacaatt cttgtcaaaa atgaaaatat taaattagat gaacttgcac
1921 ttgtgaagcc acgacagagc atgaccctca gctcaacttt caccaataaa gaggccttcc
1981 ttgatgttga ttccagtcca gaagggtctg ggactgaaga taatttacag tga
//