LOCUS AK315212 2761 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96205, Homo sapiens itchy homolog E3
ubiquitin protein ligase (mouse)(ITCH), mRNA.
ACCESSION AK315212
VERSION AK315212.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2761)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2761
/clone="TRACH3001280"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000434078"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 173..2761
/note="Homo sapiens itchy homolog E3 ubiquitin protein
ligase (mouse)(ITCH), mRNA"
/protein_id="BAG37647.1"
/translation="MSDSGSQLGSMGSLTMKSQLQITVISAKLKENKKNWFGPSPYVE
VTVDGQSKKTEKCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQTLKSDVLLGTAALDI
YETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLESEVVTNGETTCSESA
SQNDDGSRSKDETRVSTNGSDDPEDAGAGENRRVSGNNSPSLSNGGFKPSRPPRPSRP
PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLTISGGSGP
RPLNPVTQAPLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIY
YVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDLFATSQSKE
FDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVD
GIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIK
ITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNP
MYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYK
RILNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPN
GGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVL
LCGMQEIDLNDWQRHAIYRHYARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPV
GGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEET
EGFGQE"
BASE COUNT 872 a 550 c 634 g 705 t
ORIGIN
1 agctgtggtc ggggctcggg accggctgcc atcttagtct agggactgag gagtcgccgc
61 cgccccgagt cccggtacca tgcatttcac agtggccttg tggagacaac gccttaaccc
121 aaggaagtga ctcaaactgt gagaacttca ggttttccaa cctattggtg gtatgtctga
181 cagtggatca caacttggtt caatgggtag cctcaccatg aaatcacagc ttcagatcac
241 tgtcatctca gcaaaactta aggaaaataa gaagaattgg tttggaccaa gtccttacgt
301 agaggtcaca gtagatggac agtcaaagaa gacagaaaaa tgcaacaaca caaacagtcc
361 caagtggaag caacccctta cagttatcgt tacccctgtg agtaaattac attttcgtgt
421 gtggagtcac cagacactga aatctgatgt tttgttggga actgctgcat tagatattta
481 tgaaacatta aagtcaaaca atatgaaact tgaagaagta gttgtgactt tgcagcttgg
541 aggtgacaaa gagccaacag agacaatagg agacttgtca atttgtcttg atgggctaca
601 gttagagtct gaagttgtta ccaatggtga aactacatgt tcagaaagtg cttctcagaa
661 tgatgatggc tccagatcca aggatgaaac aagagtgagc acaaatggat cagatgaccc
721 tgaagatgca ggagctggtg aaaataggag agtcagtggg aataattctc catcactctc
781 aaatggtggt tttaaacctt ctagacctcc aagaccttca cgaccaccac cacccacccc
841 acgtagacca gcatctgtca atggttcacc atctgccact tctgaaagtg atgggtctag
901 tacaggctct ctgccgccga caaatacaaa tacaaataca tctgaaggag caacatctgg
961 attaataatt cctcttacta tatctggagg ctcaggccct aggccattaa atcctgtaac
1021 tcaagctccc ttgccacctg gttgggagca gagagtggac cagcacgggc gagtttacta
1081 tgtagatcat gttgagaaaa gaacaacatg ggatagacca gaacctctac ctcctggctg
1141 ggaacggcgg gttgacaaca tgggacgtat ttattatgtt gaccatttca caagaacaac
1201 aacgtggcag aggccaacac tggaatccgt ccggaactat gaacaatggc agctacagcg
1261 tagtcagctt caaggagcaa tgcagcagtt taaccagaga ttcatttatg ggaatcaaga
1321 tttatttgct acatcacaaa gtaaagaatt tgatcctctt ggtccattgc cacctggatg
1381 ggagaagaga acagacagca atggcagagt atatttcgtc aaccacaaca cacgaattac
1441 acaatgggaa gaccccagaa gtcaaggtca attaaatgaa aagcccttac ctgaaggttg
1501 ggaaatgaga ttcacagtgg atggaattcc atattttgtg gaccacaata gaagaactac
1561 cacctatata gatccccgca caggaaaatc tgccctagac aatggacctc agatagccta
1621 tgttcgggac ttcaaagcaa aggttcagta tttccggttc tggtgtcagc aactggccat
1681 gccacagcac ataaagatta cagtgacaag aaaaacattg tttgaggatt cctttcaaca
1741 gataatgagc ttcagtcccc aagatctgcg aagacgtttg tgggtgattt ttccaggaga
1801 agaaggttta gattatggag gtgtagcaag agaatggttc tttcttttgt cacatgaagt
1861 gttgaaccca atgtattgcc tgtttgaata tgcagggaag gataactact gcttgcagat
1921 aaaccccgct tcttacatca atccagatca cctgaaatat tttcgtttta ttggcagatt
1981 tattgccatg gctctgttcc atgggaaatt catagacacg ggtttttctt taccattcta
2041 taagcgtatc ttgaacaaac cagttggact caaggattta gaatctattg atccagaatt
2101 ttacaattct ctcatctggg ttaaggaaaa caatattgag gaatgtgatt tggaaatgta
2161 cttctccgtt gacaaagaaa ttctaggtga aattaagagt catgatctga aacctaatgg
2221 tggcaatatt cttgtaacag aagaaaataa agaggaatac atcagaatgg tagctgagtg
2281 gaggttgtct cgaggtgttg aagaacagac acaagctttc tttgaaggct ttaatgaaat
2341 tcttccccag caatatttgc aatactttga tgcaaaggaa ttagaggtcc ttttatgtgg
2401 aatgcaagag attgatttga atgactggca aagacatgcc atctaccgtc attatgcaag
2461 gaccagcaaa caaatcatgt ggttttggca gtttgttaaa gaaattgata atgagaagag
2521 aatgagactt ctgcagtttg ttactggaac ctgccgattg ccagtaggag gatttgctga
2581 tctcatgggg agcaatggac cacagaaatt ctgcattgaa aaagttggga aagaaaattg
2641 gctacccaga agtcatacct gttttaatcg cctggacctg ccaccataca agagctatga
2701 gcaactgaag gaaaagctgt tgtttgccat agaagaaaca gaaggatttg gacaagagta
2761 a
//