LOCUS AK315196 1371 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ96181, Homo sapiens three prime repair
exonuclease 1 (TREX1), transcriptvariant 1, mRNA.
ACCESSION AK315196
VERSION AK315196.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1371)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1371
/clone="THYMU2015754"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000434062"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 262..1371
/note="Homo sapiens three prime repair exonuclease 1
(TREX1), transcriptvariant 1, mRNA"
/protein_id="BAG37636.1"
/translation="MGPGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCS
SPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESP
PTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLA
NLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALE
RASSPSEHGPRKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDA
HARPFGTIRPMYGVTASARTKPRPSAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDP
GALSREGLLAPLGLLAILTLAVATLYGLSLATPGE"
BASE COUNT 264 a 471 c 388 g 248 t
ORIGIN
1 acttcccgcc actgctgcca gcgagagccg cgggagagtg tgcagccgag tcactactgc
61 ctgcctgcct gcctgctacg gtgagtgtgg cccccacaat gggatggcgc agggcaggag
121 ggccatgggt tcccccaccc cagactaagg gggcactagg ggaggggccg agtcatgtga
181 agagggagac cctctcagac agtcgaatgt gctggtccca ctaaggaaac cacctcaccc
241 tctccaactt cctgcctgaa aatgggccct ggagctcgca gacagggcag gattgtgcag
301 ggaaggcctg agatgtgctt ctgcccaccc cctaccccac tccctcccct tcggatctta
361 acactgggca ctcacacacc caccccatgc tcctctccag gctcagcagc aggtacgtac
421 ccaaccatgg gctcgcaggc cctgcccccg gggcccatgc agaccctcat ctttttcgac
481 atggaggcca ctggcttgcc cttctcccag cccaaggtca cggagctgtg cctgctggct
541 gtccacagat gtgccctgga gagccccccc acctctcagg ggccacctcc cacagttcct
601 ccaccaccgc gtgtggtaga caagctctcc ctgtgtgtgg ctccggggaa ggcctgcagc
661 cctgcagcca gcgagatcac aggtctgagc acagctgtgc tggcagcgca tgggcgtcaa
721 tgttttgatg acaacctggc caacctgctc ctagccttcc tgcggcgcca gccacagccc
781 tggtgcctgg tggcacacaa tggtgaccgc tacgacttcc ccctgctcca agcagagctg
841 gctatgctgg gcctcaccag tgctctggat ggtgccttct gtgtggatag catcactgcg
901 ctgaaggccc tggagcgagc aagcagcccc tcagaacacg gcccaaggaa gagctatagc
961 ctaggcagca tctacactcg cctgtatggg cagtcccctc cagactcgca cacggctgag
1021 ggtgatgtcc tggccctgct cagcatctgt cagtggagac cacaggccct gctgcggtgg
1081 gtggatgctc acgccaggcc tttcggcacc atcaggccca tgtatggggt cacagcctct
1141 gctaggacca agccaagacc atctgctgtc acaaccactg cacacctggc cacaaccagg
1201 aacactagtc ccagccttgg agagagcagg ggtaccaagg atcttcctcc agtgaaggac
1261 cctggagccc tatccaggga ggggctgctg gccccactgg gtctgctggc catcctgacc
1321 ttggcagtag ccacactgta tggactatcc ctggccacac ctggggagta g
//