LOCUS AK315029 3863 bp mRNA linear HTC 24-MAY-2008 DEFINITION Homo sapiens cDNA, FLJ95971, highly similar to Homo sapiens protocadherin 12 (PCDH12), mRNA. ACCESSION AK315029 VERSION AK315029.1 KEYWORDS HTC; HTC_FLI; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3863) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K., Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T., Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S., Goshima,N., Nomura,N. and Isogai,T. TITLE NEDO functional analysis of protein and research application project JOURNAL Unpublished (2008) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC and Biological Information Research Center (BIRC), AIST; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3863 /clone="PLACE7002420" /clone_lib="PLACE7" /db_xref="H-InvDB:HIT000433895" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="placenta" CDS 309..3863 /note="highly similar to Homo sapiens protocadherin 12 (PCDH12), mRNA" /protein_id="BAG37515.1" /translation="MMQLLQLLLGLLGPGGYLFLLGDCQEVTTLTVKYQVSEEVPSGT VIGKLSQELGREERRRQAGAAFQVLQLPQALPIQVDSEEGLLSTGRRLDREQLCRQWD PCLVSFDVLATGDLALIHVEIQVLDINDHQPRFPKGEQELEISESASLRTRIPLDRAL DPDTGPNTLHTYTLSPSEHFALDVIVGPDETKHAELIVVKELDREIHSFFDLVLTAYD NGNPPKSGTSLVKVNVLDSNDNSPAFAESSLALEIQEDAAPGTLLIKLTATDPDQGPN GEVEFFLSKHMPPEVLDTFSIDAKTGQVILRRPLDYEKNPAYEVDVQARDLGPNPIPA HCKVLIKVLDVNDNIPSIHVTWASQPSLVSEALPKDSFIALVMADDLDSGHNGLVHCW LSQELGHFRLKRTNGNTYMLLTNATLDREQWPKYTLTLLAQDQGLQPLSAKKQLSIQI SDINDNAPVFEKSRYEVSTRENNLPSLHLITIKAHDADLGINGKVSYRIQDSPVAHLV AIDSNTGEVTAQRSLNYEEMAGFEFQVIAEDSGQPMLASSVSVWVSLLDANDNAPEVV QPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIVAR DADSGANGEPLYSIRNGNEAHLFILNPHTGQLFVNVTNASSLIGSEWELEIVVEDQGS PPLQTRALLRVMFVTSVDHLRDSARKPGALSMSMLTVICLAVLLGIFGLILALFMSIC RTEKKDNRAYNCREAESTYRQQPKRPQKHIQKADIHLVPVLRGQAGEPCEVGQSHKDV DKEAMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGAPAESREVLQDTVNLLFNHPRQR NASRENLNLPEPQPATGQPRSRPLKVAGSPTGRLAGDQGSEEAPQRPPASSATLRRQR HLNGKVSPEKESGPRQILRSLVRLSVAAFAERNPVEELTVDSPPVQQISQLLSLLHQG QFQPKPNHRGNKYLAKPGGSKSAIPDTDGPSARAGGQTDPEQEEGPLDPEEDLSVKQL LEEELSSLLDPSTGLALDRLSAPDPAWMARLSLPLTTNYRDNVISPDAAATEEPRTFQ TFGKAEAPELSPTGTRLASTFVSEMSSLLEMLLEQRSSMPVEAASEALRRLSVCGRTL SLDLATSAASGMKVQGDPGGKTGTEGKSRGSSSSSRCL" BASE COUNT 907 a 1117 c 1078 g 761 t ORIGIN 1 gggtcaggtc cctcttagac cagctcttgt ccatcatttg ctgaagtgga ccaactagtt 61 ccccagtagg gggtctcccc tggcaattct tgatcggcgt ttggacatct cagatcgctt 121 ccaatgaaga tggccttgcc ttggggtcct gcttgtttca taatcatcta actatgggac 181 aaggttgtgc cggcagctct gggggaagga gcacggggct gatcaagcca tccaggaaac 241 actggaggac ttgtccagcc ttgaaagaac tctagtggtt tctgaatcta gcccacttgg 301 cggtaagcat gatgcaactt ctgcaacttc tgctggggct tttggggcca ggtggctact 361 tatttctttt aggggattgt caggaggtga ccactctcac ggtgaaatac caagtgtcag 421 aggaagtgcc atctggtaca gtgatcggga agctgtccca ggaactgggc cgggaggaga 481 ggcggaggca agctggggcc gccttccagg tgttgcagct gcctcaggcg ctccccattc 541 aggtggactc tgaggaaggc ttgctcagca caggcaggcg gctggatcga gagcagctgt 601 gccgacagtg ggatccctgc ctggtttcct ttgatgtgct tgccacaggg gatttggctc 661 tgatccatgt ggagatccaa gtgctggaca tcaatgacca ccagccacgg tttcccaaag 721 gcgagcagga gctggaaatc tctgagagcg cctctctgcg aacccggatc cccctggaca 781 gagctcttga cccagacaca ggccctaaca ccctgcacac ctacactctg tctcccagtg 841 agcactttgc cttggatgtc attgtgggcc ctgatgagac caaacatgca gaactcatag 901 tggtgaagga gctggacagg gaaatccatt cattttttga tctggtgtta actgcctatg 961 acaatgggaa cccccccaag tcaggtacca gcttggtcaa ggtcaacgtc ttggactcca 1021 atgacaatag ccctgcgttt gctgagagtt cactggcact ggaaatccaa gaagatgctg 1081 cacctggtac gcttctcata aaactgaccg ccacagaccc tgaccaaggc cccaatgggg 1141 aggtggagtt cttcctcagt aagcacatgc ctccagaggt gctggacacc ttcagtattg 1201 atgccaagac aggccaggtc attctgcgtc gacctctaga ctatgaaaag aaccctgcct 1261 acgaggtgga tgttcaggca agggacctgg gtcccaatcc tatcccagcc cattgcaaag 1321 ttctcatcaa ggttctggat gtcaatgaca acatcccaag catccacgtc acatgggcct 1381 cccagccatc actggtgtca gaagctcttc ccaaggacag ttttattgct cttgtcatgg 1441 cagatgactt ggattcagga cacaatggtt tggtccactg ctggctgagc caagagctgg 1501 gccacttcag gctgaaaaga actaatggca acacatacat gttgctaacc aatgccacac 1561 tggacagaga gcagtggccc aaatataccc tcactctgtt agcccaagac caaggactcc 1621 agcccttatc agccaagaaa cagctcagca ttcagatcag tgacatcaac gacaatgcac 1681 ctgtgtttga gaaaagcagg tatgaagtct ccacgcggga aaacaactta ccctctcttc 1741 acctcattac catcaaggct catgatgcag acttgggcat taatggaaaa gtctcatacc 1801 gcatccagga ctccccagtt gctcacttag tagctattga ctccaacaca ggagaggtca 1861 ctgctcagag gtcactgaac tatgaagaga tggccggctt tgagttccag gtgatcgcag 1921 aggacagcgg gcaacccatg cttgcatcca gtgtctctgt gtgggtcagc ctcttggatg 1981 ccaatgataa tgccccagag gtggtccagc ctgtgctcag cgatggaaaa gccagcctct 2041 ccgtgcttgt gaatgcctcc acaggccacc tgctggtgcc catcgagact cccaatggct 2101 tgggcccagc gggcactgac acacctccac tggccactca cagctcccgg ccattccttt 2161 tgacaaccat tgtggcaaga gatgcagact cgggggcaaa tggagagccc ctctacagca 2221 tccgcaatgg aaatgaagcc cacctcttca tcctcaaccc tcatacgggg cagctgttcg 2281 tcaatgtcac caatgccagc agcctcattg ggagtgagtg ggagctggag atagtagtag 2341 aggaccaggg aagccccccc ttacagaccc gagccctgtt gagggtcatg tttgtcacca 2401 gtgtggacca cctgagggac tcagcccgca agcctggggc cttgagcatg tcgatgctga 2461 cggtgatctg cctggctgta ctgttgggca tcttcgggtt gatcctggct ttgttcatgt 2521 ccatctgccg gacagaaaag aaggacaaca gggcctacaa ctgtcgggag gccgagtcca 2581 cctaccgcca gcagcccaag aggccccaga aacacattca gaaggcagac atccacctcg 2641 tgcctgtgct caggggtcag gcaggtgagc cttgtgaagt cgggcagtcc cacaaagatg 2701 tggacaagga ggcgatgatg gaagcaggct gggacccctg cctgcaggcc cccttccacc 2761 tcaccccgac cctgtacagg acgctgcgta atcaaggcaa ccagggagca ccggcggaga 2821 gccgagaggt gctgcaagac acggtcaacc tccttttcaa ccatcccagg cagaggaatg 2881 cctcccggga gaacctgaac cttcccgagc cccagcctgc cacaggccag ccacgttcca 2941 ggcctctgaa ggttgcaggc agccccacag ggaggctggc tggagaccag ggcagtgagg 3001 aagccccaca gaggccacca gcctcctctg caaccctgag acggcagcga catctcaatg 3061 gcaaagtgtc ccctgagaaa gaatcagggc cccgtcagat cctgcggagc ctggtccggc 3121 tgtctgtggc tgccttcgcc gagcggaacc ccgtggagga gctcactgtg gattctcctc 3181 ctgttcagca aatctcccag ctgctgtcct tgctgcatca gggccaattc cagcccaaac 3241 caaaccaccg aggaaataag tacttggcca agccaggagg cagcaagagt gcaatcccag 3301 acacagatgg cccaagtgca agggctggag gccagacaga cccagaacag gaggaagggc 3361 ctttggatcc tgaagaggac ctctctgtga agcaactgct agaagaagag ctgtcaagtc 3421 tgctggaccc cagcacaggt ctggccctgg accggctgag cgcccctgac ccggcctgga 3481 tggcgagact ctctttgccc ctcaccacca actaccgtga caatgtgatc tccccggatg 3541 ctgcagccac ggaggagccg aggaccttcc agacgttcgg caaggcagag gcaccagagc 3601 tgagcccaac aggcacgagg ctggccagca cctttgtctc ggagatgagc tcactgctgg 3661 agatgctgct ggaacagcgc tccagcatgc ccgtggaggc cgcctccgag gcgctgcggc 3721 ggctctcggt ctgcgggagg accctcagtt tagacttggc caccagtgca gcctcaggca 3781 tgaaagtgca aggggaccca ggtggaaaga cggggactga gggcaagagc agaggcagca 3841 gcagcagcag caggtgcctg tga //