LOCUS AK314881 970 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95782, highly similar to Homo sapiens
ectodysplasin A2 isoform receptor (XEDAR), mRNA.
ACCESSION AK314881
VERSION AK314881.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 970)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..970
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2020120"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000433747"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 77..970
/note="highly similar to Homo sapiens ectodysplasin A2
isoform receptor (XEDAR), mRNA"
/protein_id="BAG37396.1"
/translation="MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTAC
PPRRYKSSWGHHKCQSCITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQ
ECIPCTKQTPTSEVQCAFQLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFL
YCKQFFNRHCQRGGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPIL
EDDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKSSSSASYTGAETLGG
NTVESTGDRLELNVPFEVPSP"
BASE COUNT 229 a 273 c 253 g 215 t
ORIGIN
1 gttgttgcta cacgtggatg tgaaatgagt caagcggaac tttgattaca aggaatttca
61 tatactcctt cccaccatgg attgccaaga aaatgagtac tgggaccaat ggggacggtg
121 tgtcacctgc caacggtgtg gtcctggaca ggagctatcc aaggattgtg gttatggaga
181 gggtggagat gcctactgca cagcctgccc tcctcgcagg tacaaaagca gctggggcca
241 ccacaaatgt cagagttgca tcacctgtgc tgtcatcaat cgtgttcaga aggtcaactg
301 cacagctacc tctaatgctg tctgtgggga ctgtttgccc aggttctacc gaaagacacg
361 cattggaggc ctgcaggacc aagagtgcat cccgtgcacg aagcagaccc ccacctctga
421 ggttcaatgt gccttccagt tgagcttagt ggaggcagat gcacccacag tgccccctca
481 ggaggccaca cttgttgcac tggtgagcag cctgctagtg gtgtttaccc tggccttcct
541 ggggctcttc ttcctctact gcaagcagtt cttcaacaga cattgccagc gtggaggttt
601 gctgcagttt gaggctgata aaacagcaaa ggaggaatct ctcttccccg tgccacccag
661 caaggagacc agtgctgagt cccaagtgag tgagaacatc tttcagaccc agccacttaa
721 ccctatcctc gaggacgact gcagctcgac tagtggcttc cccacacagg agtcctttac
781 catggcctcc tgcacctcag agagccactc ccactgggtc cacagcccca tcgaatgcac
841 agagctggac ctgcaaaagt cttccagctc tgcctcctat actggagctg agaccttggg
901 gggaaacaca gtcgaaagca ctggagacag gctggagctc aatgtgccct ttgaagttcc
961 cagcccttaa
//