LOCUS AK314800 2843 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95673, Homo sapiens cadherin 12, type 2
(N-cadherin 2) (CDH12), mRNA.
ACCESSION AK314800
VERSION AK314800.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2843)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2843
/clone="TESTI4015463"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000433666"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 459..2843
/note="Homo sapiens cadherin 12, type 2 (N-cadherin 2)
(CDH12), mRNA"
/protein_id="BAG37328.1"
/translation="MLTRNCLSLLLWVLFDGGLLTPLQPQPQQTLATEPRENVIHLPG
QRSHFQRVKRGWVWNQFFVLEEYVGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVF
TIDETTGDIHAIRSLDREEKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKF
LDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVI
RTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHL
KVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKK
PLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDVDEPPVFSKPLYTME
VYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNEGTIATNELLDRE
STAQYNFSIIASKVSNPLLTSKVNILINVLDVNEFPPEISVPYETAVCENAKPGQIIQ
IVSAADRDLSPAGQQFSFRLSPEAAIKPNFTVRDFRNNTAGIETRRNGYSRRQQELYF
LPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILSCNVEAIFLPVGLSTGALIAILLCI
VILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHYDDEGGGEEDTQAFDIGALRNPK
VIEENKIRRDIKPDSLCLPRQRPPMEDNTDIRDFIHQRLQENDVDPTAPPYDSLATYA
YEGSGSVAESLSSIDSLTTEADQDYDYLTDWGPRFKVLADMFGEEESYNPDKVT"
BASE COUNT 862 a 639 c 646 g 696 t
ORIGIN
1 aagagtgtta gggagcctcc aaacggagca cgctcacgga gaatctcccg ttcagaaaca
61 tcgcttagtc ctcatttact cactgggaac ctcggaggat ttcagctgat gtttttctct
121 ccttagacag tgaggagctc aacataacag ggaaaaggag cacaggatgc agctacttgg
181 agggtgttga ttgaaaactt cgatctcccc accccattca cggttgattt gacggatttc
241 tcaccttgtt cacagagaga atttcaatta aggccccttt agatggaata taatacagca
301 gaagcctttt catcaaaagg attaatgcct gcatcatcat ttctgcaata aaacaagaag
361 ctaagtggtg gaggccacag acacctcaaa cctggattcc acaattctac gttaagtgtt
421 ggagttttta ttactctgct gtaggaaagc ctttgccaat gcttacaagg aactgtttat
481 ccctgcttct ctgggttctg tttgatggag gtctcctaac accactacaa ccacagccac
541 agcagacttt agccacagag ccaagagaaa atgttatcca tctgccagga caacggtcac
601 atttccaacg tgttaaacgt ggctgggtat ggaatcaatt ttttgtgctg gaagaatacg
661 tgggctccga gcctcagtat gtgggaaagc tccattccga cttagacaag ggagagggca
721 ctgtgaaata caccctctca ggagatggcg ctggcaccgt ttttaccatt gatgaaacca
781 caggggacat tcatgcaata aggagcctag atagagaaga gaaacctttc tacactcttc
841 gtgctcaggc tgtggacata gaaaccagaa agcccctgga gcctgaatca gaattcatca
901 tcaaagtgca ggatattaat gataatgagc caaagttttt ggatggacct tatgttgcta
961 ctgttccaga aatgtctcct gtgggtgcat atgtactcca ggtcaaggcc acagatgcag
1021 atgacccgac ctatggaaac agtgccagag tcgtttacag cattcttcag ggacaacctt
1081 atttctctat tgatcccaag acaggtgtta ttagaacagc tttgccaaac atggacagag
1141 aagtcaaaga acaatatcaa gtactcatcc aagccaagga tatgggagga cagcttggag
1201 gattagccgg aacaacaata gtcaacatca ctctcaccga tgtcaatgac aatccacctc
1261 gattccccaa aagcatcttc cacttgaaag ttcctgagtc ttcccctatt ggttcagcta
1321 ttggaagaat aagagctgtg gatcctgatt ttggacaaaa tgcagaaatt gaatacaata
1381 ttgttccagg agatggggga aatttgtttg acatcgtcac agatgaggat acacaagagg
1441 gagtcatcaa attgaaaaag cctttagatt ttgaaacaaa gaaggcatac actttcaaag
1501 ttgaggcttc caaccttcac cttgaccacc ggtttcactc ggcgggccct ttcaaagaca
1561 cagctacggt gaagatcagc gtgctggacg tagatgagcc accggttttc agcaagccgc
1621 tctacaccat ggaggtttat gaagacactc cggtagggac catcattggc gctgtcactg
1681 ctcaagacct ggatgtaggc agcagtgctg ttaggtactt catagattgg aagagtgatg
1741 gggacagcta ctttacaata gatggaaatg aaggaaccat cgccactaat gaattactag
1801 acagagaaag cactgcgcag tataatttct ccataattgc gagtaaagtt agtaaccctt
1861 tattgaccag caaagtcaat atactgatta atgtcttaga tgtaaatgaa tttcctccag
1921 aaatatctgt gccatatgag acagccgtgt gtgaaaatgc caagccagga cagataattc
1981 agatagtcag tgctgcagac cgagatcttt cacctgctgg gcaacaattc tcctttagat
2041 tatcacctga ggctgctatc aaaccaaatt ttacagttcg tgacttcaga aacaacacag
2101 cggggattga aacccgaaga aatggataca gccgcaggca gcaagagttg tatttcctcc
2161 ctgttgtaat agaagacagc agctaccctg tccagagcag cacaaacaca atgactattc
2221 gagtctgtag atgtgactct gatggcacca tcctgtcttg taatgtggaa gcaatttttc
2281 tacctgtagg acttagcact ggggcgttga ttgcaattct actatgcatt gttatactct
2341 tagccatagt tgtactgtat gtagcactgc gaaggcagaa gaaaaaagac accctgatga
2401 cctctaaaga agacatcaga gacaacgtca tccattacga tgatgaagga ggtggggagg
2461 aagataccca ggctttcgac atcggggctc tgagaaaccc aaaagtgatt gaggagaaca
2521 aaattcgcag ggatataaaa ccagactctc tctgtttacc tcgtcagaga ccacccatgg
2581 aagataacac agacataagg gatttcattc atcaaaggct acaggaaaat gacgtggacc
2641 caactgcccc accatacgat tcactggcca catatgccta cgaagggagt gggtccgtgg
2701 cagagtccct cagctctata gactctctca ccacagaagc cgaccaggac tatgactatc
2761 tgacagactg gggaccccgc tttaaagtct tggcagacat gtttggcgaa gaagagagtt
2821 ataaccctga taaagtcact taa
//