LOCUS AK314680 2073 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95531, highly similar to Homo sapiens
hypoxia inducible factor 3, alpha subunit (HIF3A), transcript
variant 1, mRNA.
ACCESSION AK314680
VERSION AK314680.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2073)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2073
/clone="PLACE6007740"
/clone_lib="PLACE6"
/db_xref="H-InvDB:HIT000433546"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 70..2073
/note="highly similar to Homo sapiens hypoxia inducible
factor 3, alpha subunit (HIF3A), transcript variant 1,
mRNA"
/protein_id="BAG37233.1"
/translation="MDWQDHRSTTELRKEKSRDAARSRRSQETEVLYQLAHTLPLARG
VSAHLDKASIMRLTISYLRMHRLCAAGEWNQVGAGGEPLDACYLKALEGFVMVLTAEG
DMAYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTER
CFSLRMKSTLTSRGRTLNLKAATWKVLNCSGHMRAYKPPAQTSPAGSPDSEPPLQCLV
LICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEYI
HALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVC
VHFLISQVEETGVVLSLEQTEQHSRRPIQRGAPSQKDTPNPGDSLDTPGPRILAFLHP
PSLSEAALAADPRRFCGPDLRRLLGPILDGASVAATPSTPLATRHPQSPLSADLPDEL
PVGTENVHRLFTSGKDTEAVETDLDTAQDADALDLEMLAPYISMDDDFQLNASEQLPR
AYHRPLGAVPRPRARSFHGLSPPALEPSLLPRWGSDPRLSCSSPSRGDPSASSPMAGA
RKRTLAQSSEDEDEGVELLGVRPPKRSPSPEHENFLLFPLSLSFLLTGGPAPGSLQDP
STPLLNLNEPLGLGPSLLSPYSDEDTTQPGGPFQPRAGSAQAD"
BASE COUNT 410 a 720 c 604 g 339 t
ORIGIN
1 agataagtca gggaggggac agagcggccc taggcgcgcc acagagagga gcgaggcgcc
61 agaggcacca tggactggca agaccacagg tcgaccacgg agctgcgcaa ggaaaagtcc
121 cgggatgcgg cccgcagccg gcgcagccag gagaccgagg tgctgtacca gctggctcac
181 acgctgcccc tcgcccgcgg cgtcagcgcc cacctggaca aggcctctat catgcgcctc
241 accatcagct acctgcgcat gcaccgcctc tgcgccgcag gggagtggaa ccaggtggga
301 gcagggggag aaccactgga tgcctgctac ctgaaggccc tggagggctt cgtcatggtg
361 ctcaccgccg agggagacat ggcttacctg tcggagaatg tcagcaaaca cctgggcctc
421 agtcagctgg agctcattgg acacagcatc tttgatttca tccacccctg tgaccaagag
481 gagcttcagg acgccctgac cccccagcag accctgtcca ggaggaaggt ggaggccccc
541 acggagcggt gcttctcctt gcgcatgaag agtacgctca ccagccgcgg gcgcaccctc
601 aacctcaagg cggccacctg gaaggtgctg aactgctctg gacatatgag ggcctacaag
661 ccacctgcgc agacttctcc agctgggagc cctgactcag agcccccgct gcagtgcctg
721 gtgctcatct gcgaagccat cccccaccca ggcagcctgg agcccccact gggccgaggg
781 gccttcctca gccgccacag cctggacatg aagttcacct actgtgacga caggattgca
841 gaagtggctg gctatagtcc cgatgacctg atcggctgtt ccgcctacga gtacatccac
901 gcgctggact ccgacgcggt cagcaagagc atccacacct tgctgagcaa gggccaggca
961 gtaacagggc agtatcgctt cctggcccgg agtggtggct acctgtggac ccagacccag
1021 gccacagtgg tgtcaggggg acggggcccc cagtcggaga gtatcgtctg tgtccatttt
1081 ttaatcagcc aggtggaaga gaccggagtg gtgctgtccc tggagcaaac ggagcaacac
1141 tctcgcagac ccattcagcg gggcgccccc tctcagaagg acacccctaa ccctggggac
1201 agccttgaca cccctggccc ccggatcctt gccttcctgc acccgccttc cctgagcgag
1261 gctgccctgg ccgctgaccc ccgccgtttc tgcggccctg acctccgtcg cctcctggga
1321 cccatcctgg atggggcttc agtagcagcc actcccagca ccccgctggc cacacggcac
1381 ccccaaagtc ctctttcggc tgatctccca gatgaactac ctgtgggcac cgagaatgtg
1441 cacagactct tcacctccgg gaaagacact gaggcagtgg agacagattt agatacagct
1501 caggatgctg atgctctgga tttggagatg ctggccccct acatctccat ggatgatgac
1561 ttccagctca acgccagcga gcagctaccc agggcctacc acagacctct gggggctgtc
1621 ccccggcccc gtgctcggag cttccatggc ctgtcacctc cagcccttga gccctccctg
1681 ctaccccgct gggggagtga cccccggctg agctgctcca gcccttccag aggggacccc
1741 tcagcatcct ctcccatggc tggggctcgg aagaggaccc tggcccagag ctcagaggac
1801 gaggacgagg gagtggagct gctgggagtg agacctccca aaaggtcccc cagcccagaa
1861 cacgaaaact ttctgctctt tcctctcagc ctgagtttcc ttctgacagg aggaccagcc
1921 ccagggagcc tgcaggaccc cagcacccca ctcctgaacc tgaatgagcc cctgggcctg
1981 ggcccctcac tgctctctcc gtactcagac gaggacacta cccagcccgg gggccccttc
2041 cagccaaggg caggctcagc ccaggctgac tga
//