LOCUS AK314625 2012 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95466, highly similar to Homo sapiens
chondroitin beta1,4 N-acetylgalactosaminyltransferase(ChGn), mRNA.
ACCESSION AK314625
VERSION AK314625.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2012)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2012
/clone="BRTHA3010764"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000433491"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 414..2012
/note="highly similar to Homo sapiens chondroitin beta1,4
N-acetylgalactosaminyltransferase(ChGn), mRNA"
/protein_id="BAG37191.1"
/translation="MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLA
LPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASD
AAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLE
TGLTRHPEEKPVRKDKRDELVEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTER
DKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKF
RQFMQNFREMCIEQDGRVHLTVVYFGKEEINEVKGILENTSKAANFRNFTFIQLNGEF
SRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNP
GIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGED
VHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSKAMNEASHGQLG
MLVFRHEIEAHLRKQKQKTSSKKT"
BASE COUNT 519 a 497 c 560 g 436 t
ORIGIN
1 acaggggttc ctgaccttcg ctctgccttc ctatttcaag gaaagacgcc aaggtaattt
61 tgacccagag gaggaatgat gtagccacct cctaaccttc ccttcttgaa cccccaggtc
121 ccctcttgct gttggctgca catcaggaag gctgtgatgg gaatgaaggt gaaaacttgg
181 agatttcact tcagtcatcg cttctgcctg caagatcatc ctttaaaagt agagaagctg
241 ctctgtgtgg tggttaactc caagaggcag aactcgttct agaaggaaat ggatgcaagc
301 agctccgggg gccccaaacg catgcttcct gtggtctagc ccagggaagc ccttccgtgg
361 gggccccggc tttgagggat gccgccggtt ctggacgcat ggctgattcc tgaatgatga
421 tggttcgccg ggggctgctt gcgtggattt cccgggtggt ggttttgctg gtgctcctct
481 gctgtgctat ctctgtcctg tacatgttgg cctgcacccc aaaaggtgac gaggagcagc
541 tggcactgcc cagggccaac agccccacgg ggaaggaggg gtaccaggcc gtccttcagg
601 agtgggagga gcagcaccgc aactacgtga gcagcctgaa gcggcagatc gcacagctca
661 aggaggagct gcaggagagg agtgagcagc tcaggaatgg gcagtaccaa gccagcgatg
721 ctgctggcct gggtctggac aggagccccc cagagaaaac ccaggccgac ctcctggcct
781 tcctgcactc gcaggtggac aaggcagagg tgaatgctgg cgtcaagctg gccacagagt
841 atgcagcagt gcctttcgat agctttactc tacagaaggt gtaccagctg gagactggcc
901 ttacccgcca ccccgaggag aagcctgtga ggaaggacaa gcgggatgag ttggtggaag
961 ccattgaatc agccttggag accctgaaca gtcctgcaga gaacagcccc aatcaccgtc
1021 cttacacggc ctctgatttc atagaaggga tctaccgaac agaaagggac aaagggacat
1081 tgtatgagct caccttcaaa ggggaccaca aacacgaatt caaacggctc atcttatttc
1141 gaccattcgg ccccatcatg aaagtgaaaa atgaaaagct caacatggcc aacacgctta
1201 tcaatgttat cgtgcctcta gcaaaaaggg tggacaagtt ccggcagttc atgcagaatt
1261 tcagggagat gtgcattgag caggatggga gagtccatct cactgttgtt tactttggga
1321 aagaagaaat aaatgaagtc aaaggaatac ttgaaaacac ttccaaagct gccaacttca
1381 ggaactttac cttcatccag ctgaatggag aattttctcg gggaaaggga cttgatgttg
1441 gagcccgctt ctggaaggga agcaacgtcc ttctcttttt ctgtgatgtg gacatctact
1501 tcacatctga attcctcaat acgtgtaggc tgaatacaca gccagggaag aaggtatttt
1561 atccagttct tttcagtcag tacaatcctg gcataatata cggccaccat gatgcagtcc
1621 ctcccttgga acagcagctg gtcataaaga aggaaactgg attttggaga gactttggat
1681 ttgggatgac gtgtcagtat cggtcagact tcatcaatat aggtgggttt gatctggaca
1741 tcaaaggctg gggcggagag gatgtgcacc tttatcgcaa gtatctccac agcaacctca
1801 tagtggtacg gacgcctgtg cgaggactct tccacctctg gcatgagaag cgctgcatgg
1861 acgagctgac ccccgagcag tacaagatgt gcatgcagtc caaggccatg aacgaggcat
1921 cccacggcca gctgggcatg ctggtgttca ggcacgagat agaggctcac cttcgcaaac
1981 agaaacagaa gacaagtagc aaaaaaacat ga
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