LOCUS AK314557 1732 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95381, Homo sapiens tripartite
motif-containing 16 (TRIM16), mRNA.
ACCESSION AK314557
VERSION AK314557.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1732)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1732
/clone="NTONG2005629"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000433423"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 38..1732
/note="Homo sapiens tripartite motif-containing 16
(TRIM16), mRNA"
/protein_id="BAG37142.1"
/translation="MAELDLMAPGPLPRATAQPPAPLSPDSGSPSPDSGSASPVEEED
VGSSEKLGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTRRVKAVKSCLTCMVNYCE
EHLQPHQVNIKLQSHLLTEPVKDHNWRYCPAHHSPLSAFCCPDQQCICQDCCQEHSGH
TIVSLDAARRDKEAELQCTQLDLERKLKLNENAISRLQANQKSVLVSVSEVKAVAEMQ
FGELLAAVRKAQANVMLFLEEKEQAALSQANGIKAHLEYRSAEMEKSKQELERMAAIS
NTVQFLEEYCKFKNTEDITFPSVYVGLKDKLSGIRKVITESTVHLIQLLENYKKKLQE
FSKEEEYDIRTQVSAVVQRKYWTSKPEPSTREQFLQYAYDITFDPDTAHKYLRLQEEN
RKVTNTTPWEHPYPDLPSRFLHWRQVLSQQSLYLHRYYFEVEIFGAGTYVGLTCKGID
RKGEERNSCISGNNFSWSLQWNGKEFTAWYSDMETPLKAGPFRRLGVYIDFPGGILSF
YGVEYDTMTLVHKFACKFSEPVYAAFWLSKKENAIRIVDLGEEPEKPAPSLGVTAP"
BASE COUNT 438 a 465 c 493 g 336 t
ORIGIN
1 gacagaagaa agacagccta ggagcagagc ctcccagatg gctgagttgg atctaatggc
61 tccagggcca ctgcccaggg ccactgctca gcccccagcc cctctcagcc cagactctgg
121 gtcacccagc ccagattctg ggtcagccag cccagtggaa gaagaggacg tgggctcctc
181 ggagaagctt ggcagggaga cggaggaaca ggacagcgac tctgcagagc agggggatcc
241 tgctggtgag gggaaagagg tcctgtgtga cttctgcctt gatgacacca gaagagtgaa
301 ggcagtgaag tcctgtctaa cctgcatggt gaattactgt gaagagcact tgcagccgca
361 tcaggtgaac atcaaactgc aaagccacct gctgaccgag ccagtgaagg accacaactg
421 gcgatactgc cctgcccacc acagcccact gtctgctttc tgctgccctg atcagcagtg
481 catctgccag gactgttgcc aggagcacag tggccacacc atagtctccc tggatgcagc
541 ccgcagggac aaggaggctg aactccagtg cacccagtta gacttggagc ggaaactcaa
601 gttgaatgaa aatgccatct ccaggctcca ggctaaccaa aagtctgttc tggtgtcggt
661 gtcagaggtc aaagcggtgg ctgaaatgca gtttggggaa ctccttgctg ctgtgaggaa
721 ggcccaggcc aatgtgatgc tcttcttaga ggagaaggag caagctgcgc tgagccaggc
781 caacggtatc aaggcccacc tggagtacag gagtgccgag atggagaaga gcaagcagga
841 gctggagagg atggcggcca tcagcaacac tgtccagttc ttggaggagt actgcaagtt
901 taagaacact gaagacatca ccttccctag tgtttacgta gggctgaagg ataaactctc
961 gggcatccgc aaagttatca cggaatccac tgtacactta atccagttgc tggagaacta
1021 taagaaaaag ctccaggagt tttccaagga agaggagtat gacatcagaa ctcaagtgtc
1081 tgccgttgtt cagcgcaaat attggacttc caaacctgag cccagcacca gggaacagtt
1141 cctccaatat gcgtatgaca tcacgtttga cccggacaca gcacacaagt atctccggct
1201 gcaggaggag aaccgcaagg tcaccaacac cacgccctgg gagcatccct acccggacct
1261 ccccagcagg ttcctgcact ggcggcaggt gctgtcccag cagagtctgt acctgcacag
1321 gtactatttt gaggtggaga tcttcggggc aggcacctat gttggcctga cctgcaaagg
1381 catcgaccgg aaaggggagg agcgcaacag ttgcatttcc ggaaacaact tctcctggag
1441 cctccaatgg aacgggaagg agttcacggc ctggtacagt gacatggaga ccccactcaa
1501 agctggccct ttccggaggc tcggggtcta tatcgacttc ccgggaggga tcctttcctt
1561 ctatggcgta gagtatgata ccatgactct ggttcacaag tttgcctgca aattttcaga
1621 accagtctat gctgccttct ggctttccaa gaaggaaaac gccatccgga ttgtagatct
1681 gggagaggaa cccgagaagc cagcaccgtc cttgggggtg actgctccct ag
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