LOCUS AK314511 1234 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95329, Homo sapiens Cockayne syndrome 1
(classical) (CKN1), mRNA.
ACCESSION AK314511
VERSION AK314511.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1234)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1234
/clone="UTERU2007201"
/clone_lib="UTERU2"
/db_xref="H-InvDB:HIT000433377"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 44..1234
/note="Homo sapiens Cockayne syndrome 1 (classical)
(CKN1), mRNA"
/protein_id="BAG37111.1"
/translation="MLGFLSARQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGG
GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV
ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVA
VGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR
ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN
GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHY
KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSS
DEEG"
BASE COUNT 373 a 227 c 287 g 347 t
ORIGIN
1 gtcatggcga cgtccagtgc tccagccggt gtgaggacac gatatgctgg ggtttttgtc
61 cgcacgccaa acgggtttgg aggaccctct tcgccttcgg agagcagagt caacacggag
121 agttttggga ctggaattaa ataaagacag agatgttgaa agaatccacg gcggtggaat
181 taacaccctt gacattgaac ctgttgaagg gagatacatg ttatcaggtg gttcagatgg
241 tgtgattgta ctttatgacc ttgagaactc cagcagacaa tcttattaca catgtaaagc
301 agtgtgttcc attggcagag atcatcctga tgttcacaga tacagtgtgg agactgtaca
361 gtggtatcct catgacactg gcatgttcac atcaagctca tttgataaaa ctctgaaagt
421 atgggataca aatacattac aaactgcaga tgtatttaat tttgaggaaa cagtttatag
481 tcatcatatg tctccagtct ccaccaagca ctgtttggta gcagttggta ctagaggacc
541 caaagtacaa ctttgtgact tgaagtctgg atcctgttct cacattctac agggtcacag
601 acaagaaata ttagcagttt cctggtctcc acgttatgac tatatcttgg caacagcaag
661 tgctgacagt agagtaaaat tatgggatgt gagaagagca tcaggatgtt tgattactct
721 tgatcaacat aatgggaaaa agtcacaagc tgttgaatca gcaaacactg ctcataatgg
781 gaaagttaat ggcttatgtt ttacaagtga tggacttcac ctcctcactg ttggtacaga
841 taatcgaatg aggctctgga atagttccaa tggagaaaac acacttgtga actatggaaa
901 agtttgtaat aacagtaaaa aaggattgaa attcactgtc tcctgtggct gcagttcaga
961 atttgttttt gtaccatatg gtagcaccat tgctgtttat acagtttact caggagaaca
1021 gataactatg cttaagggac attataaaac tgttgactgc tgtgtatttc agtcaaattt
1081 ccaggaactt tatagtggta gcagagactg caacattctg gcttgggttc catccttata
1141 tgagccagtt cctgatgatg atgagactac aacaaaatca caattaaatc cggcctttga
1201 agatgcctgg agcagcagtg atgaagaagg atga
//