LOCUS AK314396 2165 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95172, Homo sapiens contactin 4 (CNTN4),
transcript variant 3, mRNA.
ACCESSION AK314396
VERSION AK314396.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2165)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2165
/clone="TESTI2010276"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000433262"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 69..2165
/note="Homo sapiens contactin 4 (CNTN4), transcript
variant 3, mRNA"
/protein_id="BAG37020.1"
/translation="MEENVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNIT
IVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECK
PKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASS
TGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDG
DHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVT
IDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTVPELIDGKTFTATVV
GLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITW
ETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLASADASRYVFRNESVHPFSPFEVKVG
VFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLEKNRGRIQGY
EVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSATVNV
TTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIE
TNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGASTSNACTL
SAISTIMISLTARSSL"
BASE COUNT 674 a 465 c 519 g 507 t
ORIGIN
1 ataccagatg gaggctttga tttgctcaac ctaattggat tcaaaaaata aatgatattc
61 acgtggccat ggaagaaaat gtcttttggg aatgtaaagc aaatggaagg cctaagccta
121 catacaagtg gctaaaaaat ggcgaacctc tgctaactcg ggatagaatt caaattgagc
181 aaggaacact caacataaca atagtgaacc tctcagatgc tggcatgtat cagtgtttgg
241 cagagaataa acatggagtt atcttttcca acgcagagct tagtgttata gctgtaggtc
301 cagatttttc aagaacactc ttgaaaagag taactcttgt caaagtggga ggtgaagttg
361 tcattgagtg taagccaaaa gcgtctccaa aacctgttta cacctggaag aaaggaaggg
421 atatattaaa agaaaatgaa agaattacca tttctgaaga tggaaacctc agaatcatca
481 acgttactaa atcagacgct gggagttata cctgtatagc cactaaccat tttggaactg
541 ctagcagtac tggaaacttg gtagtgaaag atccaacaag ggtaatggta cccccttcca
601 gtatggatgt cactgttgga gagagtattg ttttaccgtg ccaggtaacg catgatcact
661 cgctagacat cgtgtttact tggtcattta atggacacct gatagacttt gacagagatg
721 gggaccactt tgaaagagtt ggagggcagg attcagctgg tgatttgatg atccgaaaca
781 tccaactgaa gcatgctggg aaatatgtct gcatggtcca aacaagtgtg gacaggctat
841 ctgctgctgc agacctgatt gtaagaggtc ctccaggtcc cccagaggct gtgacaatag
901 acgaaatcac agataccact gctcagctct cctggagacc cgggcctgac aaccacagcc
961 ccatcaccat gtatgtcatt caagccagga ctccattctc cgtgggctgg caagcagtca
1021 gtacagtccc agaactcatt gatgggaaga cattcacagc gaccgtggtg ggtttgaacc
1081 cttgggttga atatgaattc cgcacagttg cagccaacgt gattgggatt ggggagccca
1141 gccgcccctc agagaaacgg agaacagaag aagctctccc cgaagtcaca ccagcgaatg
1201 tcagtggtgg cggaggcagc aaatctgaac tggttataac ctgggagacg gtccctgagg
1261 aattacagaa tggtcgtggc tttggttatg tggtggcctt ccggccctac ggtaaaatga
1321 tctggatgct gacagtgctg gcctcagctg acgcctctag atacgtgttc aggaatgaga
1381 gcgtgcaccc cttctctccc tttgaggtta aagtaggtgt cttcaacaac aaaggagaag
1441 gccctttcag tcccaccacg gtggtgtatt ctgcagaaga agaacccacc aaaccaccag
1501 ccagtatctt tgccagaagt ctttctgcca cagatattga agttttctgg gcctccccac
1561 tggagaagaa tagaggacga atacaaggtt atgaggttaa atattggaga catgaagaca
1621 aagaagaaaa tgctagaaaa atacgaacag ttggaaatca gacatcaaca aaaatcacga
1681 acttaaaagg cagtgtgctg tatcacttag ctgtcaaggc atataattct gctgggacag
1741 gcccctctag tgcaacagtc aatgtgacaa cccgaaagcc accaccaagt caaccccccg
1801 gaaacatcat atggaattca tcagactcca aaattatcct gaattgggat caagtgaagg
1861 ccctggataa tgagtcggaa gtaaaaggat acaaagtctt gtacagatgg aacagacaaa
1921 gcagcacatc tgtcattgaa acaaataaaa catcggtgga gctttctttg cctttcgatg
1981 aagattatat aatagaaatt aagccattca gcgacggagg agatggcagc agcagtgaac
2041 aaattcgaat tccaaagata tcaaatgcct acgcgagagg atctggggct tccacttcga
2101 atgcatgtac gctgtcagcc atcagtacaa taatgatttc cctcacagct aggtccagtt
2161 tatga
//