LOCUS AK314375 2792 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95147, highly similar to Homo sapiens
chloride channel, calcium activated, family member 1 (CLCA1), mRNA.
ACCESSION AK314375
VERSION AK314375.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2792)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2792
/clone="COLON2002661"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000433241"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 48..2792
/note="highly similar to Homo sapiens chloride channel,
calcium activated, family member 1 (CLCA1), mRNA"
/protein_id="BAG37002.1"
/translation="MGPFKSSVFILILHLLEGALSNSLIQLNNNGYEGIVVAIDPNVP
EDETLIQQIKDMVTQASLYLFEATGKRFYFKNVAILIPETWKTKADYVRPKLETYKNA
DVLVAESTPPGNDEPYTEQMGNCGEKGERIHLTPDFIAGKKLAEYGPQGRAFVHEWAH
LRWGVFDEYNNDEKFYLSNGRIQAVRCSAGITGTNVVKKCQGGSCYTKRCTFNKVTGL
YEKGCEFVLQSRQTEKASIMFAQHVDSIVEFCTEQNHNKEAPNKQNQKCNLRSTWEVI
RDSEDFKKTTPMTTQPPNPTFSLLQIGQRIVCLVLDKSGSMATGNRLNRLNQAGQLFL
LQTVELGSWVGMVTFDSAAHVQSELIQINSGSDRDTLAKRLPAAASGGTSICSGLRSA
FTVIRKKYPTDGSEIVLLTDGEDNTISGCFNEVKQSGAIIHTVALGPSAAQELEELSK
MTGGLQTYASDQVQNNGLIDAFGALSSGNGAVSQRSIQLESKGLTLQNSQWMNGTVIV
DSTVGKDTLFLITWTTQPPQILLWDPSGQKQGGFVVDKNTKMAYLQIPGIAKVGTWKY
SLQASSQTLTLTVTSRASNATLPPITVTSKTNKDTSKFPSPLVVYANIRQGASPILRA
SVTALIESVNGKTVTLELLDNGAGADATKDDGVYSRYFTTYDTNGRYSVKVRALGGVN
AARRRVIPQQSGALYIPGWIENDEIQWNPPRPEINKDDVQHKQVCFSRTSSGGSFVAS
DVPNAPIPDLFPPGQITDLKAEIHGGSLINLTWTAPGDDYDHGTAHKYIIRISTSILD
LRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDLFIAIQAVDKVDLKSEI
SNIARVSLFIPPQTPPETPSPDETSAPCPNIHINSTIPGIHILKIMWKWIGELQLSIA
"
BASE COUNT 850 a 627 c 638 g 677 t
ORIGIN
1 gtaacccgca ttttccaaag agagaaatca cagggagatg tacagcaatg gggccattta
61 agagttctgt gttcatcttg attcttcacc ttctagaagg ggccctgagt aattcactca
121 ttcagctgaa caacaatggc tatgaaggca ttgtcgttgc aatcgacccc aatgtgccag
181 aagatgaaac actcattcaa caaataaagg acatggtgac ccaggcatct ctgtatctgt
241 ttgaagctac aggaaagcga ttttatttca aaaatgttgc cattttgatt cctgaaacat
301 ggaagacaaa ggctgactat gtgagaccaa aacttgagac ctacaaaaat gctgatgttc
361 tggttgctga gtctactcct ccaggtaatg atgaacccta cactgagcag atgggcaact
421 gtggagagaa gggtgaaagg atccacctca ctcctgattt cattgcagga aaaaagttag
481 ctgaatatgg accacaaggt agggcatttg tccatgagtg ggctcatcta cgatggggag
541 tatttgacga gtacaataat gatgagaaat tctacttatc caatggaaga atacaagcag
601 taagatgttc agcaggtatt actggtacaa atgtagtaaa gaagtgtcag ggaggcagct
661 gttacaccaa aagatgcaca ttcaataaag taacaggact ctatgaaaaa ggatgtgagt
721 ttgttctcca atcccgccag acggagaagg cttctataat gttcgcacaa catgttgatt
781 ctatagttga attctgtaca gaacaaaacc acaacaaaga agctccaaac aagcaaaatc
841 aaaaatgcaa tctccgaagc acatgggaag tgatccgtga ttctgaggac tttaagaaaa
901 ccactcctat gacaacacag ccaccaaatc ccaccttctc attgctgcag attggacaaa
961 gaattgtgtg tttagtcctt gacaaatctg gaagcatggc gactggtaac cgcctcaatc
1021 gactgaatca agcaggccag cttttcctgc tgcagacagt tgagctgggg tcctgggttg
1081 ggatggtgac atttgacagt gctgcccatg tacaaagtga actcatacag ataaacagtg
1141 gcagtgacag ggacacactc gccaaaagat tacctgcagc agcttcagga gggacgtcca
1201 tctgcagcgg gcttcgatcg gcatttactg tgattaggaa gaaatatcca actgatggat
1261 ctgaaattgt gctgctgacg gatggggaag acaacactat aagtgggtgc tttaacgagg
1321 tcaaacaaag tggtgccatc atccacacag tcgctttggg gccctctgca gctcaagaac
1381 tagaggagct gtccaaaatg acaggaggtt tacagacata tgcttcagat caagttcaga
1441 acaatggcct cattgatgct tttggggccc tttcatcggg aaatggagct gtctctcagc
1501 gctccatcca gcttgagagt aagggattaa ccctccagaa cagccagtgg atgaatggca
1561 cagtgatcgt ggacagcacc gtgggaaagg acactttgtt tcttatcacc tggacaacgc
1621 agcctcccca aatccttctc tgggatccca gtggacagaa gcaaggtggc tttgtagtgg
1681 acaaaaacac caaaatggcc tacctccaaa tcccaggcat tgctaaggtt ggcacttgga
1741 aatacagtct gcaagcaagc tcacaaacct tgaccctgac tgtcacgtcc cgtgcgtcca
1801 atgctaccct gcctccaatt acagtgactt ccaaaacgaa caaggacacc agcaaattcc
1861 ccagccctct ggtagtttat gcaaatattc gccaaggagc ctccccaatt ctcagggcca
1921 gtgtcacagc cctgattgaa tcagtgaatg gaaaaacagt taccttggaa ctactggata
1981 atggagcagg tgctgatgct actaaggatg acggtgtcta ctcaaggtat ttcacaactt
2041 atgacacgaa tggtagatac agtgtaaaag tgcgggctct gggaggagtt aacgcagcca
2101 gacggagagt gataccccag cagagtgggg cactgtacat acctggctgg attgagaatg
2161 atgaaataca atggaatcca ccaagacctg aaattaataa ggatgatgtt caacacaagc
2221 aagtgtgttt cagcagaaca tcctcgggag gctcatttgt ggcttctgat gtcccaaatg
2281 ctcccatacc tgatctcttc ccacctggcc aaatcaccga cctgaaggcg gaaattcacg
2341 ggggcagtct cattaatctg acttggacag ctcctgggga tgattatgac catggaacag
2401 ctcacaagta tatcattcga ataagtacaa gtattcttga tctcagagac aagttcaatg
2461 aatctcttca agtgaatact actgctctca tcccaaagga agccaactct gaggaagtct
2521 ttttgtttaa accagaaaac attacttttg aaaatggcac agatcttttc attgctattc
2581 aggctgttga taaggtcgat ctgaaatcag aaatatccaa cattgcacga gtatctttgt
2641 ttattcctcc acagactccg ccagagacac ctagtcctga tgaaacgtct gctccttgtc
2701 ctaatattca tatcaacagc accattcctg gcattcacat tttaaaaatt atgtggaagt
2761 ggataggaga actgcagctg tcaatagcct ag
//