LOCUS AK314360 1886 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95128, highly similar to Homo sapiens
sorting nexin 9 (SNX9), mRNA.
ACCESSION AK314360
VERSION AK314360.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1886)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1886
/clone="PLACE7005264"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000433226"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 99..1886
/note="highly similar to Homo sapiens sorting nexin 9
(SNX9), mRNA"
/protein_id="BAG36992.1"
/translation="MATKARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLVGRN
IKGERGLVPTDYVEILPSDGKDQFSCGNSVADQAFLDSLSASTAQASSSAASNNHQVG
SGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTAFGHPQAYQGPATG
DDDDWDEDWDGPKSSSYFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQ
YLLAKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTP
TNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAW
MTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDL
VEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFS
SSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIG
THKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSV
IRLYLEQQVQFYETIAEKLRQALSRFPVM"
BASE COUNT 554 a 440 c 492 g 400 t
ORIGIN
1 agtagccgag cgcccttgcc tttgcctgcg cggctcagaa tcaccatccg cggcgcggga
61 gacgagccgg ccgtcccggg ccgggggacc cgcccgccat ggccaccaag gctcgggtta
121 tgtatgattt tgctgctgaa cctggaaata atgaactgac ggttaatgaa ggagaaatca
181 tcacaatcac aaatccggat gtaggtggag gatggctggt aggaagaaac atcaaaggag
241 aacgagggct ggttcccaca gactacgttg aaattttacc cagtgatgga aaagatcaat
301 tttcttgtgg aaattcagtg gctgaccaag ccttccttga ttctctctca gccagcacag
361 ctcaggccag ttcgtcggct gccagcaaca atcaccaggt tggcagtggc aatgacccct
421 ggtcagcctg gagtgcctcc aaatctggga actgggaaag ctcagaaggc tggggggccc
481 agccagaggg ggctggagcc caaagaaaca caaacactcc caacaactgg gacactgcct
541 tcggccaccc ccaggcctac caaggaccag caactggtga tgatgatgac tgggatgaag
601 actgggatgg gcccaaatcc tcttcctact ttaaggattc agagtcagct gatgcaggcg
661 gcgctcagcg aggaaacagt cgtgctagtt cctcatccat gaaaattccc cttaacaaat
721 ttcctggatt tgcgaaacct ggcacggaac agtatttgtt ggccaaacaa ctagcaaaac
781 ccaaagagaa aattcccatc attgttggag attatggccc aatgtgggtt tatcctacct
841 ctacttttga ctgtgtggta gcagatccca ggaaaggctc caaaatgtat ggtctaaaga
901 gctacatcga atatcagcta acacctacta acactaatcg atctgtaaac cacaggtata
961 agcactttga ctggttatat gagcgtctcc tggttaagtt tgggtcagcc attccaatcc
1021 cttctcttcc agacaaacaa gtcacaggcc gctttgaaga ggaatttatc aaaatgcgca
1081 tggagagact tcaggcctgg atgaccagga tgtgtcgcca tccagtaatc tcagaaagtg
1141 aagttttcca gcagttccta aatttccgag atgagaagga atggaaaact ggaaagagga
1201 aggccgagag agatgagctg gcgggagtca tgatattttc caccatggaa ccagaggcac
1261 ctgacttgga cttagtagaa atagagcaga agtgcgaggc tgtggggaag ttcaccaagg
1321 ccatggatga cggcgtgaag gagctgctga cggtggggca ggagcactgg aagcgctgca
1381 cgggcccatt acccaaggaa tatcagaaga taggaaaggc cttgcagagt ttggccacag
1441 tgttcagttc cagtggctat caaggtgaaa cagatctcaa tgatgcaata acagaagcag
1501 gaaagactta tgaagaaatt gccagtctcg tggcagaaca gccaaagaaa gatctccatt
1561 tcctgatgga atgtaatcac gagtataaag gttttcttgg ctgcttccct gacatcattg
1621 gcactcacaa gggagcaata gaaaaagtga aagaaagtga caaactagtt gcaacaagta
1681 aaatcaccct acaagacaaa cagaacatgg tgaagagagt cagcatcatg tcttacgcgt
1741 tgcaagctga gatgaatcac tttcacagta accggatcta tgattacaac agtgtcatcc
1801 gcctgtacct ggagcagcaa gtgcaatttt acgaaacgat tgcagaaaag ctgaggcagg
1861 ccctcagccg ctttccagtg atgtag
//