LOCUS AK314358 4018 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95126, Homo sapiens TBP-interacting protein
(TIP120A), mRNA.
ACCESSION AK314358
VERSION AK314358.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4018)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4018
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8007128"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000433224"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 326..4018
/note="Homo sapiens TBP-interacting protein (TIP120A),
mRNA"
/protein_id="BAG36990.1"
/translation="MASASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDD
SERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQL
RDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMAD
MLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHL
LSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCI
QAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQG
SDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKA
DVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKT
RQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNH
SPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIK
DLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEIT
RLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYS
DSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIG
LVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYS
IAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLE
LKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLK
EIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKG
YLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTF
NSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFEC
MYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLV
EPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISS
NPELAAIFESIQKDSSSTNLESMDTS"
BASE COUNT 1170 a 812 c 901 g 1135 t
ORIGIN
1 agcgagacgg ccctgagtgg aagtgtctgg ctccccgtag aggcccttct gtacgccccg
61 ccgcccatga gctcgttctc acgcgaacag cgccgtcgtt aggctggctc tgtagcctcg
121 gcttaccccg ggacaggccc acgcctcgcc agggaggggg cagcccgtcg aggcgcctcc
181 ctagtcagcg tcggcgtcgc gctgcgaccc tggaagcggg agccgccgcg agcgagagga
241 ggagctccag tggcggcggc ggcggcggca gcggcagcgg gcagcagctc cagcagcgcc
301 agcaggcggg atcgaggccg tcaacatggc gagcgcctcg taccacattt ccaatttgct
361 ggaaaaaatg acatccagcg acaaggactt taggtttatg gctacaaatg atttgatgac
421 ggaactgcag aaagattcca tcaagttgga tgatgatagt gaaaggaaag tagtgaaaat
481 gattttgaag ttattggaag ataaaaatgg agaggtacag aatttagctg tcaaatgtct
541 tggtccttta gtgagtaaag tgaaagaata ccaagtagag acaattgtag ataccctctg
601 cactaacatg ctttctgata aagaacaact tcgagacatt tcaagtattg gtcttaaaac
661 agtaattgga gaacttcctc cagcttccag tggctctgca ttagctgcta atgtatgtaa
721 aaagattact gggcgtctta caagtgcaat agcaaaacag gaagatgtct ctgttcagct
781 agaagccttg gatattatgg ctgatatgtt gagcaggcaa ggaggacttc ttgttaattt
841 ccatccttca attctgacct gtctacttcc ccagttgacc agccctagac ttgcagtgag
901 gaaaagaacc attatcgctc ttggccatct ggttatgagc tgtggaaata tagtttttgt
961 agatcttatt gaacatctgt tgtcagagtt gtccaaaaat gattctatgt caacaacaag
1021 aacctacata caatgtattg ctgctattag taggcaagct ggtcatagaa taggtgaata
1081 ccttgagaag ataattcctt tggtggtaaa attttgcaat gtagatgatg atgaattaag
1141 agagtactgt attcaagcct ttgaatcatt tgtaagaaga tgtcctaagg aagtatatcc
1201 tcatgtttct accattataa atatttgtct taaatatctt acctatgatc caaattataa
1261 ttacgatgat gaagatgaag atgaaaatgc aatggatgct gatggtggtg atgatgatga
1321 tcaagggagt gatgatgaat acagtgatga tgatgacatg agttggaaag tgagacgtgc
1381 agctgcgaag tgcttggatg ctgtagttag cacaaggcat gaaatgcttc cagaattcta
1441 caagaccgtc tctcctgcac taatatccag atttaaagag cgtgaagaga atgtaaaggc
1501 agatgttttt cacgcatacc tttctctttt gaagcaaact cgtcctgtac aaagttggct
1561 atgtgaccct gatgcaatgg agcagggaga aacaccttta acaatgcttc agagtcaggt
1621 tcccaacatt gttaaagctc ttcacaaaca gatgaaagaa aaaagtgtga agacccgaca
1681 gtgttgtttt aacatgttaa ctgagctggt aaatgtatta cctggggccc taactcaaca
1741 cattcctgta cttgtaccag gaatcatttt ctcactgaat gataaatcaa gctcatcgaa
1801 tttgaagatc gatgctttgt catgtctata cgtaatcctc tgtaaccatt ctcctcaagt
1861 cttccatcct cacgttcagg ctttggttcc tccagtggtg gcttgtgttg gagacccatt
1921 ttacaaaatt acatctgaag cacttcttgt tactcaacag cttgtcaaag taattcgtcc
1981 tttagatcag ccttcctcgt ttgatgcaac tccttatatc aaagatctat ttacctgtac
2041 cattaagaga ttaaaagcag ctgacattga tcaggaagtc aaggaaaggg ctatttcctg
2101 tatgggacaa attatttgca accttggaga caatttgggt tctgacttgc ctaatacact
2161 tcagattttc ttggagagac taaagaatga aattaccagg ttaactacag taaaggcatt
2221 gacgctgatt gctgggtcac ctttgaagat agatttgagg cctgttctgg gagaaggggt
2281 tcctatcctt gcttcatttc ttagaaaaaa ccagagagct ttgaaactgg gtactctttc
2341 tgcccttgat attctaataa aaaactatag tgacagcttg acagctgcca tgattgatgc
2401 agttctagat gagctcccac ctcttatcag cgaaagtgat atgcatgttt cacaaatggc
2461 catcagtttt cttaccactt tggcaaaagt atatccctcc tccctttcaa agataagtgg
2521 atccattctc aatgaactta ttggacttgt gagatcaccc ttattgcagg ggggagctct
2581 tagtgccatg ctagactttt tccaagctct ggttgtcact ggaacaaata atttaggata
2641 catggatttg ttgcgcatgc tgactggtcc agtttactct cagagcacag ctcttactca
2701 taagcagtct tattattcca ttgccaaatg tgtagctgcc cttactcgag catgccctaa
2761 agagggacca gctgtagtag gtcagtttat tcaagatgtc aagaactcaa ggtctacaga
2821 ttccattcgt ctcttagctc tactttctct tggagaagtt gggcatcata ttgacttaag
2881 tggacagttg gaactaaaat ctgtaatact agaagctttc tcatctccta gtgaagaagt
2941 caaatcagct gcatcctatg cattaggcag cattagtgtg ggcaaccttc ctgaatatct
3001 gccgtttgtc ctgcaagaaa taactagtca acccaaaagg cagtatcttt tacttcattc
3061 cttgaaggaa attattagct ctgcatcagt ggtgggcctt aaaccatatg ttgaaaacat
3121 ctgggcctta ttactaaagc actgtgagtg tgcagaggaa ggaaccagaa atgttgttgc
3181 tgaatgtcta ggaaaactca ctctaattga tccagaaact ctccttccac ggcttaaggg
3241 gtacttgata tcaggctcat catatgcccg aagctcagtg gttacggctg tgaaatttac
3301 aatttctgac catccacaac ctattgatcc actgttaaag aactgcatag gtgatttcct
3361 aaaaactttg gaagacccag atttgaatgt gagaagagta gccttggtca catttaattc
3421 agcagcacat aacaagccat cattaataag ggatctattg gatactgttc ttccacatct
3481 ttacaacgaa acaaaagtta gaaaggagct tataagagag gtagaaatgg gtccatttaa
3541 acatacggtt gatgatggtc tggatattag aaaggcagca tttgagtgta tgtacacact
3601 tctagacagt tgtcttgata gacttgatat ctttgaattt ctaaatcatg ttgaagatgg
3661 tttgaaggac cattatgata ttaagatgct gacattttta atgttggtga gactgtctac
3721 cctttgtcca agtgcagtac tgcagaggtt ggaccgactt gttgagccat tacgtgcaac
3781 atgtacaact aaggtaaagg caaactcagt aaagcaggag tttgaaaaac aagatgaatt
3841 aaagcgatct gccatgagag cagtagcagc actgctaacc attccagaag cagagaagag
3901 tccactgatg agtgaattcc agtcacagat cagttctaac cctgagctgg cggctatctt
3961 tgaaagtatc cagaaagatt catcatctac taacttggaa tcaatggaca ctagttag
//