LOCUS AK314260 2436 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95007, highly similar to Homo sapiens BRCA1
associated RING domain 1 (BARD1), mRNA.
ACCESSION AK314260
VERSION AK314260.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2436)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2436
/cell_type="normal dermal fibroblasts (Neonatal Skin)
(NHDF2564)"
/clone="DFNES2009296"
/clone_lib="DFNES2"
/db_xref="H-InvDB:HIT000433126"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal dermal fibroblasts"
/organism="Homo sapiens"
CDS 103..2436
/note="highly similar to Homo sapiens BRCA1 associated
RING domain 1 (BARD1), mRNA"
/protein_id="BAG36925.1"
/translation="MPDNRQPRNRQPRIRSGNEPRSAPAMEPDGRGAWAHSRAALDRL
EKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLD
SMIQLCSKLRNLLHDNELSDLKEDKPRKSLFNDAGSKKNSIKMWFSPRSKKVRYVVSK
ASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERAKKASARSGKKQKKKTLAEINQKW
NLEAEKEDGEFDSKEESKQKLVSFCSQPSVISSPQINGEIDLLASGSLTESECFGSLT
EVSLPLAEQIESPDTKSRNEVVTPEKVCKNYLTSKKSLPLENNGKRGHHNRLSSPISK
RCRTSILSTSGDFVKQTVPSENIPLPECSSPPSCKRKVGGTSGSKNSNMSDEFISLSP
GTPPSTLSSSSYRRVMSSPSAMKLLPNMAVKRNHRGETLLHIASIKGDIPSVEYLLQN
GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHMD
IVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSASHCSVMNTGQRR
DGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGI
LNGCWILKFEWVKACLRRKVCEQEEKYEIPEGPRRSRLNREQLLPKLFDGCYFYLWGT
FKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYE
DLCNYHPERVRQGKVWKAPSSWFIDCVMSFELLPLDS"
BASE COUNT 727 a 514 c 579 g 616 t
ORIGIN
1 agcttggccg gtttcgagcc gctggcctgc agcttccctg tggtttcccg aggcttcctt
61 gcttcccgct ctgcgaggag cctttcatcc gaaggcggga cgatgccgga taatcggcag
121 ccgaggaacc ggcagccgag gatccgctcc gggaacgagc ctcgttccgc gcccgccatg
181 gaaccggatg gtcgcggtgc ctgggcccac agtcgcgccg cgctcgaccg cctggagaag
241 ctgctgcgct gctcgcgttg tactaacatt ctgagagagc ctgtgtgttt aggaggatgt
301 gagcacatct tctgtagtaa ttgtgtaagt gactgcattg gaactggatg tccagtgtgt
361 tacaccccgg cctggataca agacttgaag ataaatagac aactggacag catgattcaa
421 ctttgtagta agcttcgaaa tttgctacat gacaatgagc tgtcagattt gaaagaagat
481 aaacctagga aaagtttgtt taatgatgca ggaagcaaga agaattcaat taaaatgtgg
541 tttagccctc gaagtaagaa agtcagatat gttgtgagta aagcttcagt gcaaacccag
601 cctgcaataa aaaaagatgc aagtgctcag caagactcat atgaatttgt ttccccaagt
661 cctcctgcag atgtttctga gagggctaaa aaggcttctg caagatctgg aaaaaagcaa
721 aaaaagaaaa ctttagctga aatcaaccaa aaatggaatt tagaggcaga aaaagaagat
781 ggtgaatttg actccaaaga ggaatctaag caaaagctgg tatccttctg tagccaacca
841 tctgttatct ccagtcctca gataaatggt gaaatagact tactagcaag tggctccttg
901 acagaatctg aatgttttgg aagtttaact gaagtctctt taccattggc tgagcaaata
961 gagtctccag acactaagag caggaatgaa gtagtgactc ctgagaaggt ctgcaaaaat
1021 tatcttacat ctaagaaatc tttgccatta gaaaataatg gaaaacgtgg ccatcacaat
1081 agactttcca gtcccatttc taagagatgt agaaccagca ttctgagcac cagtggagat
1141 tttgttaagc aaacggtgcc ctcagaaaat ataccattgc ctgaatgttc ttcaccacct
1201 tcatgcaaac gtaaagttgg tggtacatca gggagcaaaa acagtaacat gtccgatgaa
1261 ttcattagtc tttcaccagg tacaccacct tctacattaa gtagttcaag ttacaggcga
1321 gtgatgtcta gtccctcagc aatgaagctg ttgcccaata tggctgtgaa aagaaatcat
1381 agaggagaga ctttgctcca tattgcttct attaagggcg acataccttc tgttgaatac
1441 cttttacaaa atggaagtga tccaaatgtt aaagaccatg ctggatggac accattgcat
1501 gaagcttgca atcatgggca cctgaaggta gtggaattat tgctccagca taaggcattg
1561 gtgaacacca ccgggtatca aaatgactca ccacttcacg atgcagccaa gaatgggcac
1621 atggatatag tcaagctgtt actttcctat ggagcctcca gaaatgctgt taatatattt
1681 ggcctgcggc ctgtcgatta tacagatgat gaaagtatga aatcgctatt gctgctacca
1741 gagaagaatg aatcatcctc agctagccac tgctcagtaa tgaacactgg gcagcgtagg
1801 gatggacctc ttgtacttat aggcagtggg ctgtcttcag aacaacagaa aatgctcagt
1861 gagcttgcag taattcttaa ggctaaaaaa tatactgagt ttgacagtac agtaactcat
1921 gttgttgttc ctggtgatgc agttcaaagt accttgaagt gtatgcttgg gattctcaat
1981 ggatgctgga ttctaaaatt tgaatgggta aaagcatgtc tacgaagaaa agtatgtgaa
2041 caggaagaaa agtatgaaat tcctgaaggt ccacgcagaa gcaggctcaa cagagaacag
2101 ctgttgccaa agctgtttga tggatgctac ttctatttgt ggggaacctt caaacaccat
2161 ccaaaggaca accttattaa gctcgtcact gcaggtgggg gccagatcct cagtagaaag
2221 cccaagccag acagtgacgt gactcagacc atcaatacag tcgcatacca tgcgagaccc
2281 gattctgatc agcgcttctg cacacagtat atcatctatg aagatttgtg taattatcac
2341 ccagagaggg ttcggcaggg caaagtctgg aaggctcctt cgagctggtt tatagactgt
2401 gtgatgtcct ttgagttgct tcctcttgac agctga
//