LOCUS AK314255 3528 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ95002, highly similar to Homo sapiens
integrin, alpha 10 (ITGA10), mRNA.
ACCESSION AK314255
VERSION AK314255.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3528)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3528
/clone="TRACH3003213"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000433121"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 25..3528
/note="highly similar to Homo sapiens integrin, alpha 10
(ITGA10), mRNA"
/protein_id="BAG36921.1"
/translation="MELPFVTHLFLPLVFLTGLCSPFNLDEHHPRLFPGPPEAEFGYS
VLQHVGGGQRWMLVGAPWDGPSGDRRGDVYRCPVGGAHNAPCAKGHLGDYQLGNSSHP
AVNMHLGMSLLETDGDGGFMACAPLWSRACGSSVFSSGICARVDASFQPQGSLAPTAQ
RCPTYMDVVIVLDGSNSIYPWSEVQTFLRRLVGKLFIDPEQIQVGLVQYGESPVHEWS
LGDFRTKEEVVRAAKNLSRREGRETKTAQAIMVACTEGFSQSHGGRPEAARLLVVVTD
GESHDGEELPAALKACEAGRVTRYGIAVLGHYLRRQRDPSSFLREIRTIASDPDERFF
FNVTDEAALTDIVDALGDRIFGLEGSHAENESSFGLEMSQIGFSTHRLKDGILFGMVG
AYDWGGSVLWLEGGHRLFPPRMALEDEFPPALQNHAAYLGYSVSSMLLRGGRRLFLSG
APRFRHRGKVIAFQLKKDGAVRVAQSLQGEQIGSYFGSELCPLDTDRDGTTDVLLVAA
PMFLGPQNKETGRVYVYLVGQQSLLTLQGTLQPEPPQDARFGFAMGALPDLNQDGFAD
VAVGAPLEDGHQGALYLYHGTQSGVRPHPAQRIAAASMPHALSYFGRSVDGRLDLDGD
DLVDVAVGAQGAAILLSSRPIVHLTPSLEVTPQAISVVQRDCRRRGQEAVCLTAALCF
QVTSRTPGRWDHQFYMRFTASLDEWTAGARAAFDGSGQRLSPRRLRLSVGNVTCEQLH
FHVLDTSDYLRPVALTVTFALDNTTKPGPVLNEGSPTSIQKLVPFSKDCGPDNECVTD
LVLQVNMDIRGSRKAPFVVRGGRRKVLVSTTLENRKENAYNTSLSLIFSRNLHLASLT
PQRESPIKVECAAPSAHARLCSVGHPVFQTGAKVTFLLEFEFSCSSLLSQVFVKLTAS
SDSLERNGTLQDNTAQTSAYIQYEPHLLFSSESTLHRYEVHPYGTLPVGPGPEFKTTL
RVQNLGCYVVSGLIISALLPAVAHGGNYFLSLSQVITNNASCIVQNLTEPPGPPVHPE
ELQHTNRLNGSNTQCQVVRCHLGQLAKGTEVSVGLLRLVHNEFFRRAKFKSLTVVSTF
ELGTEEGSVLQLTEASRWSESLLEVVQTRPILISLWILIGSVLGGLLLLALLVFCLWK
LGFFAHKKIPEEEKREEKLEQ"
BASE COUNT 767 a 938 c 993 g 830 t
ORIGIN
1 atactggaca gaaaccgatc aggcatggaa ctccccttcg tcactcacct gttcttgccc
61 ctggtgttcc tgacaggtct ctgctccccc tttaacctgg atgaacatca cccacgccta
121 ttcccagggc caccagaagc tgaatttgga tacagtgtct tacaacatgt tgggggtgga
181 cagcgatgga tgctggtggg cgccccctgg gatgggcctt caggcgaccg gaggggggac
241 gtttatcgct gccctgtagg gggggcccac aatgccccat gtgccaaggg ccacttaggt
301 gactaccaac tgggaaattc atctcatcct gctgtgaata tgcacctggg gatgtctctg
361 ttagagacag atggtgatgg gggattcatg gcctgtgccc ctctctggtc tcgtgcttgt
421 ggcagctctg tcttcagttc tgggatatgt gcccgtgtgg atgcttcatt ccagcctcag
481 ggaagcctgg cacccactgc ccaacgctgc ccaacataca tggatgttgt cattgtcttg
541 gatggctcca acagcatcta cccctggtct gaagttcaga ccttcctacg aagactggta
601 gggaaactgt ttattgaccc agaacagata caggtgggac tggtacagta tggggagagc
661 cctgtacatg agtggtccct gggagatttc cgaacgaagg aagaagtggt gagagcagca
721 aagaacctca gtcggcggga gggacgagaa acaaagactg cccaagcaat aatggtggcc
781 tgcacagaag ggttcagtca gtcccatggg ggccgacccg aggctgccag gctactggtg
841 gttgtcactg atggagagtc ccatgatgga gaggagcttc ctgcagcact aaaggcctgt
901 gaggctggaa gagtgacacg ctatgggatt gcagtccttg gtcactacct ccggcggcag
961 cgagatccca gctctttcct gagagaaatt agaactattg ccagtgatcc agatgagcga
1021 ttcttcttca atgtcacaga tgaggctgct ctgactgaca ttgtggatgc actaggagat
1081 cggatttttg gccttgaagg gtcccatgca gaaaacgaaa gctcctttgg gctggaaatg
1141 tctcagattg gtttctccac tcatcggcta aaggatggga ttctttttgg gatggtgggg
1201 gcctatgact ggggaggctc tgtgctatgg cttgaaggag gccaccgcct tttcccccca
1261 cgaatggcac tggaagacga gttcccccct gcattgcaga accatgcagc ctacctgggt
1321 tactctgttt cttccatgct tttgcggggt ggacgccgcc tgtttctctc tggggctcct
1381 cgatttagac atcgaggaaa agtcatcgcc ttccagctta agaaagatgg ggctgtgagg
1441 gttgcccaga gcctccaggg ggagcagatt ggttcatact ttggcagtga gctctgccca
1501 ttggatacag atagggatgg aacaactgat gtcttacttg tggctgcccc catgttcctg
1561 ggaccccaga acaaggaaac aggacgtgtt tatgtgtatc tggtaggcca gcagtccttg
1621 ctgaccctcc aaggaacact tcagccagaa cccccccagg atgctcggtt tggctttgcc
1681 atgggagctc ttcctgatct gaaccaagat ggttttgctg atgtggctgt gggggcgcct
1741 ctggaagatg ggcaccaggg agcactgtac ctgtaccatg gaacccagag tggagtcagg
1801 ccccatcctg cccagaggat tgctgctgcc tccatgccac atgccctcag ctactttggc
1861 cgaagtgtgg atggtcggct agatctggat ggagatgatc tggtcgatgt ggctgtgggt
1921 gcccaggggg cagccatcct gctcagctcc cggcccattg tccatctgac cccatcactg
1981 gaggtgaccc cacaggccat cagtgtggtt cagagggact gtaggcggcg aggccaagag
2041 gcagtctgtc tgactgcagc cctttgcttc caagtgacct cccgtactcc tggtcgctgg
2101 gatcaccaat tctacatgag gttcaccgca tcactggatg aatggactgc tggggcacgt
2161 gcagcatttg atggctctgg ccagaggttg tcccctcgga ggctccggct cagtgtgggg
2221 aatgtcactt gtgagcagct acacttccat gtgctggata catcagatta cctccggcca
2281 gtggccttga ctgtgacctt tgccttggac aatactacaa agccagggcc tgtgctgaat
2341 gagggctcac ccacctctat acaaaagctg gtccccttct caaaggattg tggccctgac
2401 aatgaatgtg tcacagacct ggtgcttcaa gtgaatatgg acatcagagg ctccaggaag
2461 gccccatttg tggttcgagg tggccggcgg aaagtgctgg tatctacaac tctggagaac
2521 agaaaggaaa atgcttacaa tacgagcctg agtctcatct tctctagaaa cctccacctg
2581 gccagtctca ctcctcagag agagagccca ataaaggtgg aatgtgccgc cccttctgct
2641 catgcccggc tctgcagtgt ggggcatcct gtcttccaga ctggagccaa ggtgaccttt
2701 ctgctagagt ttgagtttag ctgctcctct ctcctgagcc aggtcttcgt gaagctgact
2761 gccagcagtg acagcctgga gagaaatggg acccttcaag ataacacagc ccagacctca
2821 gcctacatcc aatatgagcc ccacctcctg ttctctagtg agtctaccct gcaccgctat
2881 gaggttcacc catatgggac cctcccagtg ggtcctggcc cagaattcaa aaccactctc
2941 agggttcaga acctaggctg ctatgtggtc agtggcctca tcatctcagc cctccttcca
3001 gctgtggccc atgggggcaa ttacttccta tcactgtctc aagtcatcac taacaatgca
3061 agctgcatag tgcagaacct gactgaaccc ccaggcccac ctgtgcatcc agaggagctt
3121 caacacacaa acagactgaa tgggagcaat actcagtgtc aggtggtgag gtgccacctt
3181 gggcagctgg caaaggggac tgaggtctct gttggactat tgaggctggt tcacaatgaa
3241 tttttccgaa gagccaagtt caagtccctg acggtggtca gcacctttga gctaggaacc
3301 gaagagggca gtgtcctaca gctgactgaa gcctcccgtt ggagtgagag cctcttggag
3361 gtggttcaga cccggcctat cctcatctcc ctgtggatcc tcataggcag tgtcctggga
3421 gggttgctcc tgcttgctct ccttgtcttc tgcctgtgga agcttggctt ctttgcccat
3481 aagaaaatcc ctgaggaaga aaaaagagaa gagaagttgg agcaatga
//