LOCUS AK314249 2547 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ94995, highly similar to Homo sapiens LGN
protein (LGN), mRNA.
ACCESSION AK314249
VERSION AK314249.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2547)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2547
/clone="FEBRA2017289"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000433115"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 514..2547
/note="highly similar to Homo sapiens LGN protein (LGN),
mRNA"
/protein_id="BAG36915.1"
/translation="MREDHSFHVRYRMEASCLELALEGERLCKSGDCRAGVSFFEAAV
QVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLG
NTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDV
GEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAH
EQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKETLLLARQLKDRAVEAQ
SCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQA
MHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLNGV
RPKLGRRHSMENMELMKLTPEKVQNWNSEILAKQKPLIAKPSAKLLFVNRLKGKKYKT
NSSTKVLQDASNSIDHRIPNSQRKISADTIGDEGFFDLLSRFQSNRMDDQRCCLQEKN
CHTASTTTSSTPPKMMLKTSSVPVVSPNTDEFLDLLASSQSRRLDDQRASFSNLPGLR
LTQNSQSVLSHLMTNDNKEADEDFFDILVKCQGSRLDDQRCAPPPATTKGPTVPDEDF
FSLILRSQGKRMDEQRVLLQRDQNRDTDFGLKDFLQNNALLEFKNSGKKSADH"
BASE COUNT 780 a 522 c 613 g 632 t
ORIGIN
1 gcagaggagg gcggtgttga gaccggcgga gcggcgggac ccctaggtgg cggagggacg
61 ctccgggaaa gcgaggggcg ctacgagctc tggcccacgt gacctgccgg gggcgggagc
121 agggggcgcg ccggcctcct gcggtgcccc tgccttgggg aggggccgtg accacccgtc
181 tgtcgcccga ggcggccgcc gctgcacctt caccgcgtac ccgggacccg cccgcccgcg
241 ggagaaatgt tgctgaagtg ctgctgaaag ggccagagat gcaaggattt gggatacact
301 ttgaaccttt aagctgtctg acattgacct cctttcatta ttaataaaga agaatcagga
361 gcttaggatg tattaacacc aattcattaa tatactaacc ggacaatgtt ctacaaacaa
421 ttctacattg taaaggactg gattggcaca aaataaaata attttatttt attcagctta
481 taatatgact cgatggagga aaatttgata agcatgagag aagaccattc ttttcatgtt
541 cgttacagaa tggaagcttc ttgcctagag ctggccttgg aaggggaacg tctatgtaaa
601 tcaggagact gccgcgctgg cgtgtcattc tttgaagctg cagttcaagt tggaactgaa
661 gacctaaaaa cacttagcgc tatttacagc cagttgggca atgcttattt ctatttgcat
721 gattatgcca aagcattaga atatcaccat catgatttaa cccttgcaag gactattgga
781 gaccagctgg gggaagcgaa agctagtggt aatctgggaa acaccttaaa agttcttggg
841 aattttgacg aagccatagt ttgttgtcag cgacacctag atatttccag agagcttaat
901 gacaaggtgg gagaagcaag agcactttac aatcttggga atgtgtatca tgccaaaggg
961 aaaagttttg gttgccctgg tccccaggat gtaggagaat ttccagaaga agtgagagat
1021 gctctgcagg cagccgtgga tttttatgag gaaaacctat cattagtgac tgctttgggt
1081 gaccgagcgg cacaaggacg tgcctttgga aatcttggaa acacacatta cctccttggc
1141 aacttcaggg atgcagttat agctcatgag cagcgtctcc ttattgcaaa agaatttgga
1201 gataaagcag ctgaaagaag agcatatagc aaccttggaa atgcatatat atttcttggt
1261 gaatttgaaa ctgcctcgga atactacaag gagacactac tgttggcccg acagcttaaa
1321 gaccgagctg tagaagcaca gtcttgttac agtcttggaa atacatatac tttacttcaa
1381 gactatgaaa aggccattga ttatcatctg aagcacttag caattgctca agagctgaat
1441 gatagaattg gtgaaggaag agcatgttgg agcttaggaa atgcatacac agcactagga
1501 aatcatgatc aagcaatgca ttttgctgaa aagcacttgg aaatttcaag agaggttggg
1561 gataaaagtg gtgaactaac agcacgactt aatctctcag accttcaaat ggttcttggt
1621 ctgagctaca gcacaaataa ctccataatg tctgaaaata ctgaaattga tagcagtttg
1681 aatggtgtac gccccaagtt gggacgccgg catagtatgg aaaatatgga acttatgaag
1741 ttaacaccag aaaaggtaca gaactggaac agtgaaattc ttgctaagca aaaacctctt
1801 attgccaaac cttctgcaaa gctactcttt gtcaacagac tgaaggggaa aaaatacaaa
1861 acgaattcct ccactaaagt tctccaagat gccagtaatt ctattgacca ccgaattcca
1921 aattctcaga ggaaaatcag tgcagatact attggagatg aagggttctt tgacttatta
1981 agccgatttc aaagcaatag gatggatgat cagagatgtt gcttacaaga aaagaactgc
2041 catacagctt caacaacaac ttcttccact ccccctaaaa tgatgctaaa aacatcatct
2101 gttcctgtgg tatcccccaa cacggatgag tttttagatc ttcttgccag ctcacagagt
2161 cgccgtctgg atgaccagag ggctagtttc agtaatttgc cagggcttcg tctaacacaa
2221 aacagccagt cggtacttag ccacctgatg actaatgaca acaaagaggc tgatgaagat
2281 ttctttgaca tccttgtaaa atgtcaagga tccagattag atgatcaaag atgtgctcca
2341 ccacctgcta ccacaaaggg tccgacagta ccagatgaag actttttcag ccttatttta
2401 cggtcccagg gaaagagaat ggatgaacag agagttcttt tacaaagaga tcaaaacaga
2461 gacactgact ttgggctaaa ggactttttg caaaataatg ctttgttgga gtttaaaaat
2521 tcagggaaaa aatcggcaga ccattag
//